Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm5364-201ENSMUST00000216789 889 ntBASIC11.47□□□□□ -0.57
Hmx3P42581 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmx3P42581 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hmx3P42581 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmx3P42581 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmx3P42581 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.46□□□□□ -0.57
Hmx3P42581 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmx3P42581 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmx3P42581 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.46□□□□□ -0.57
Hmx3P42581 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hmx3P42581 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.46□□□□□ -0.57
Hmx3P42581 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Hmx3P42581 Gm13464-201ENSMUST00000119418 935 ntBASIC11.46□□□□□ -0.57
Hmx3P42581 Gm1401-201ENSMUST00000122048 772 ntBASIC11.46□□□□□ -0.57
Hmx3P42581 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Hmx3P42581 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Hmx3P42581 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.46□□□□□ -0.57
Hmx3P42581 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.46□□□□□ -0.57
Hmx3P42581 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmx3P42581 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmx3P42581 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.45□□□□□ -0.58
Hmx3P42581 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmx3P42581 Gm25925-201ENSMUST00000158314 306 ntBASIC11.45□□□□□ -0.58
Hmx3P42581 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmx3P42581 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Hmx3P42581 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmx3P42581 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmx3P42581 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hmx3P42581 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmx3P42581 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.45□□□□□ -0.58
Hmx3P42581 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hmx3P42581 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmx3P42581 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms