Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.72□□□□□ -0.69
P01728 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01728 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P01728 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01728 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
P01728 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC10.72□□□□□ -0.69
P01728 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01728 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P01728 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01728 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01728 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P01728 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P01728 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01728 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01728 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
P01728 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
P01728 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.71□□□□□ -0.69
P01728 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Gm11543-201ENSMUST00000120758 370 ntBASIC10.71□□□□□ -0.69
P01728 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Mir5131-201ENSMUST00000175426 93 ntBASIC10.71□□□□□ -0.69
P01728 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.71□□□□□ -0.69
P01728 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.71□□□□□ -0.69
P01728 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.71□□□□□ -0.69
P01728 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.71□□□□□ -0.69
P01728 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.71□□□□□ -0.69
P01728 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.71□□□□□ -0.69
P01728 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.71□□□□□ -0.69
P01728 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.71□□□□□ -0.69
P01728 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.71□□□□□ -0.69
P01728 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.71□□□□□ -0.69
P01728 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.71□□□□□ -0.69
P01728 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.71□□□□□ -0.69
P01728 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.71□□□□□ -0.69
P01728 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
P01728 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01728 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01728 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
P01728 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01728 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01728 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
P01728 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01728 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
P01728 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.7□□□□□ -0.7
P01728 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
P01728 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
P01728 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
P01728 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
P01728 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
P01728 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
P01728 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
P01728 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.7□□□□□ -0.7
P01728 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
P01728 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Gm12350-201ENSMUST00000121208 462 ntBASIC10.7□□□□□ -0.7
P01728 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01728 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.7□□□□□ -0.7
P01728 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms