Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.77■□□□□ 0.44
Apaf1O88879 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.77■□□□□ 0.44
Apaf1O88879 Gm8463-201ENSMUST00000208573 613 ntBASIC17.77■□□□□ 0.44
Apaf1O88879 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Apaf1O88879 Gm17330-201ENSMUST00000221047 165 ntBASIC17.77■□□□□ 0.44
Apaf1O88879 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.77■□□□□ 0.44
Apaf1O88879 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Apaf1O88879 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Apaf1O88879 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Apaf1O88879 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Apaf1O88879 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Apaf1O88879 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Apaf1O88879 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Apaf1O88879 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Apaf1O88879 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Apaf1O88879 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
Apaf1O88879 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Apaf1O88879 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Apaf1O88879 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Apaf1O88879 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Apaf1O88879 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.76■□□□□ 0.43
Apaf1O88879 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.76■□□□□ 0.43
Apaf1O88879 Gm44719-201ENSMUST00000206404 149 ntBASIC17.76■□□□□ 0.43
Apaf1O88879 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.76■□□□□ 0.43
Apaf1O88879 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.76■□□□□ 0.43
Apaf1O88879 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Apaf1O88879 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Apaf1O88879 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.75■□□□□ 0.43
Apaf1O88879 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.75■□□□□ 0.43
Apaf1O88879 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Apaf1O88879 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Apaf1O88879 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Apaf1O88879 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.75■□□□□ 0.43
Apaf1O88879 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Apaf1O88879 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Gm38223-201ENSMUST00000194484 695 ntBASIC17.75■□□□□ 0.43
Apaf1O88879 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Apaf1O88879 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Apaf1O88879 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.75■□□□□ 0.43
Apaf1O88879 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Apaf1O88879 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Apaf1O88879 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.74■□□□□ 0.43
Apaf1O88879 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.74■□□□□ 0.43
Apaf1O88879 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.74■□□□□ 0.43
Apaf1O88879 Gm42550-201ENSMUST00000201553 960 ntBASIC17.74■□□□□ 0.43
Apaf1O88879 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.74■□□□□ 0.43
Apaf1O88879 Gm6983-201ENSMUST00000214912 628 ntBASIC17.74■□□□□ 0.43
Apaf1O88879 Gm5035-201ENSMUST00000215581 927 ntBASIC17.74■□□□□ 0.43
Apaf1O88879 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.74■□□□□ 0.43
Apaf1O88879 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.74■□□□□ 0.43
Apaf1O88879 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apaf1O88879 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Apaf1O88879 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Apaf1O88879 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Apaf1O88879 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Apaf1O88879 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.73■□□□□ 0.43
Apaf1O88879 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Apaf1O88879 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Apaf1O88879 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms