Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm6983-201ENSMUST00000214912 628 ntBASIC14.19□□□□□ -0.14
Cldn5O54942 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.19□□□□□ -0.14
Cldn5O54942 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.19□□□□□ -0.14
Cldn5O54942 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 Gm5356-201ENSMUST00000093326 615 ntBASIC14.19□□□□□ -0.14
Cldn5O54942 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cldn5O54942 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cldn5O54942 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn5O54942 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cldn5O54942 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn5O54942 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn5O54942 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn5O54942 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.18□□□□□ -0.14
Cldn5O54942 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.18□□□□□ -0.14
Cldn5O54942 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn5O54942 Gm42550-201ENSMUST00000201553 960 ntBASIC14.18□□□□□ -0.14
Cldn5O54942 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.18□□□□□ -0.14
Cldn5O54942 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn5O54942 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.17□□□□□ -0.14
Cldn5O54942 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn5O54942 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Cldn5O54942 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cldn5O54942 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn5O54942 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cldn5O54942 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn5O54942 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Gm15371-201ENSMUST00000117057 784 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm14127-201ENSMUST00000117906 678 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.17□□□□□ -0.14
Cldn5O54942 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm12403-201ENSMUST00000121384 959 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.17□□□□□ -0.14
Cldn5O54942 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cldn5O54942 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cldn5O54942 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn5O54942 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms