Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Gm16202-201ENSMUST00000117532 544 ntBASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Gm12795-201ENSMUST00000117594 539 ntBASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Gm11637-201ENSMUST00000120601 592 ntBASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc188F6WEU2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gm24749-201ENSMUST00000157838 343 ntBASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gm17889-201ENSMUST00000198410 598 ntBASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc188F6WEU2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Gm3096-201ENSMUST00000185770 364 ntBASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms