Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm7851-201ENSMUST00000117574 323 ntBASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm12453-201ENSMUST00000121981 331 ntBASIC7.43□□□□□ -1.22
Herc1E9PZP8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gzmn-202ENSMUST00000225535 989 ntBASIC7.43□□□□□ -1.22
Herc1E9PZP8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC7.43□□□□□ -1.22
Herc1E9PZP8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm9135-201ENSMUST00000182963 990 ntBASIC7.43□□□□□ -1.22
Herc1E9PZP8 Mir6407-201ENSMUST00000184510 101 ntBASIC7.43□□□□□ -1.22
Herc1E9PZP8 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 BC106175-202ENSMUST00000219344 1213 ntBASIC7.43□□□□□ -1.22
Herc1E9PZP8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Herc1E9PZP8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm42473-201ENSMUST00000201056 2291 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm14371-201ENSMUST00000138925 1518 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm24954-201ENSMUST00000178831 110 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm18038-201ENSMUST00000197900 485 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm5805-201ENSMUST00000072779 456 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm25226-201ENSMUST00000158198 123 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm17944-201ENSMUST00000186351 643 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm4930-201ENSMUST00000219926 1087 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm19009-201ENSMUST00000223072 823 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC7.42□□□□□ -1.22
Herc1E9PZP8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Herc1E9PZP8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms