Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm10060-201ENSMUST00000212002 111 ntBASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Trav3n-3A0A0G2JEM0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm9103-201ENSMUST00000119371 405 ntBASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms