Protein–RNA interactions for Protein: Q9WV55

Vapa, Vesicle-associated membrane protein-associated protein A, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VapaQ9WV55 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VapaQ9WV55 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
VapaQ9WV55 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VapaQ9WV55 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
VapaQ9WV55 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VapaQ9WV55 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VapaQ9WV55 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VapaQ9WV55 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VapaQ9WV55 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.6■□□□□ 0.89
VapaQ9WV55 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VapaQ9WV55 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
VapaQ9WV55 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VapaQ9WV55 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VapaQ9WV55 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VapaQ9WV55 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VapaQ9WV55 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
VapaQ9WV55 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VapaQ9WV55 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VapaQ9WV55 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VapaQ9WV55 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.6■□□□□ 0.89
VapaQ9WV55 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VapaQ9WV55 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VapaQ9WV55 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VapaQ9WV55 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
VapaQ9WV55 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.58■□□□□ 0.89
VapaQ9WV55 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VapaQ9WV55 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
VapaQ9WV55 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VapaQ9WV55 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VapaQ9WV55 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
VapaQ9WV55 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.58■□□□□ 0.89
VapaQ9WV55 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VapaQ9WV55 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VapaQ9WV55 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.57■□□□□ 0.88
VapaQ9WV55 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
VapaQ9WV55 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
VapaQ9WV55 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VapaQ9WV55 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VapaQ9WV55 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VapaQ9WV55 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VapaQ9WV55 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VapaQ9WV55 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VapaQ9WV55 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
VapaQ9WV55 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.56■□□□□ 0.88
VapaQ9WV55 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.56■□□□□ 0.88
VapaQ9WV55 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
VapaQ9WV55 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VapaQ9WV55 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.55■□□□□ 0.88
VapaQ9WV55 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VapaQ9WV55 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VapaQ9WV55 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.54■□□□□ 0.88
VapaQ9WV55 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VapaQ9WV55 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
VapaQ9WV55 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
VapaQ9WV55 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VapaQ9WV55 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.54■□□□□ 0.88
VapaQ9WV55 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VapaQ9WV55 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VapaQ9WV55 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VapaQ9WV55 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
VapaQ9WV55 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VapaQ9WV55 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VapaQ9WV55 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VapaQ9WV55 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VapaQ9WV55 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VapaQ9WV55 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VapaQ9WV55 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
VapaQ9WV55 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VapaQ9WV55 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VapaQ9WV55 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
VapaQ9WV55 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VapaQ9WV55 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.51■□□□□ 0.87
VapaQ9WV55 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VapaQ9WV55 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VapaQ9WV55 Scarna2-201ENSMUST00000157560 414 ntBASIC20.51■□□□□ 0.87
VapaQ9WV55 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.51■□□□□ 0.87
VapaQ9WV55 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VapaQ9WV55 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VapaQ9WV55 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VapaQ9WV55 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
VapaQ9WV55 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VapaQ9WV55 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VapaQ9WV55 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VapaQ9WV55 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VapaQ9WV55 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VapaQ9WV55 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
VapaQ9WV55 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
VapaQ9WV55 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VapaQ9WV55 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
VapaQ9WV55 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VapaQ9WV55 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VapaQ9WV55 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.49■□□□□ 0.87
VapaQ9WV55 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VapaQ9WV55 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.48■□□□□ 0.87
VapaQ9WV55 Gm16437-201ENSMUST00000025669 507 ntBASIC20.48■□□□□ 0.87
VapaQ9WV55 Gm9806-201ENSMUST00000051080 552 ntBASIC20.48■□□□□ 0.87
VapaQ9WV55 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VapaQ9WV55 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VapaQ9WV55 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.47■□□□□ 0.87
VapaQ9WV55 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms