Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps29Q9QZ88 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps29Q9QZ88 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.67■□□□□ 0.9
Vps29Q9QZ88 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps29Q9QZ88 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vps29Q9QZ88 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps29Q9QZ88 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps29Q9QZ88 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.66■□□□□ 0.9
Vps29Q9QZ88 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vps29Q9QZ88 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps29Q9QZ88 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps29Q9QZ88 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps29Q9QZ88 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps29Q9QZ88 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps29Q9QZ88 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.66■□□□□ 0.9
Vps29Q9QZ88 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps29Q9QZ88 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps29Q9QZ88 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps29Q9QZ88 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps29Q9QZ88 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps29Q9QZ88 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps29Q9QZ88 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps29Q9QZ88 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps29Q9QZ88 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps29Q9QZ88 Gm27502-201ENSMUST00000183495 199 ntBASIC20.63■□□□□ 0.89
Vps29Q9QZ88 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps29Q9QZ88 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps29Q9QZ88 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps29Q9QZ88 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps29Q9QZ88 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps29Q9QZ88 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps29Q9QZ88 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps29Q9QZ88 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.6■□□□□ 0.89
Vps29Q9QZ88 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Vps29Q9QZ88 Gm14523-201ENSMUST00000117260 558 ntBASIC20.6■□□□□ 0.89
Vps29Q9QZ88 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps29Q9QZ88 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps29Q9QZ88 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps29Q9QZ88 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps29Q9QZ88 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps29Q9QZ88 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps29Q9QZ88 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps29Q9QZ88 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps29Q9QZ88 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Vps29Q9QZ88 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps29Q9QZ88 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Vps29Q9QZ88 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps29Q9QZ88 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps29Q9QZ88 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Vps29Q9QZ88 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vps29Q9QZ88 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vps29Q9QZ88 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps29Q9QZ88 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.57■□□□□ 0.88
Vps29Q9QZ88 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.57■□□□□ 0.88
Vps29Q9QZ88 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.57■□□□□ 0.88
Vps29Q9QZ88 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps29Q9QZ88 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms