Protein–RNA interactions for Protein: Q9JJW6

Alyref2, Aly/REF export factor 2, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alyref2Q9JJW6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alyref2Q9JJW6 Scarna2-201ENSMUST00000157560 414 ntBASIC19.27■□□□□ 0.68
Alyref2Q9JJW6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alyref2Q9JJW6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alyref2Q9JJW6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Alyref2Q9JJW6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alyref2Q9JJW6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alyref2Q9JJW6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alyref2Q9JJW6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alyref2Q9JJW6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.26■□□□□ 0.67
Alyref2Q9JJW6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Alyref2Q9JJW6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Alyref2Q9JJW6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Alyref2Q9JJW6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alyref2Q9JJW6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alyref2Q9JJW6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alyref2Q9JJW6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alyref2Q9JJW6 Gm11687-201ENSMUST00000118911 886 ntBASIC19.25■□□□□ 0.67
Alyref2Q9JJW6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alyref2Q9JJW6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alyref2Q9JJW6 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.25■□□□□ 0.67
Alyref2Q9JJW6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alyref2Q9JJW6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alyref2Q9JJW6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.24■□□□□ 0.67
Alyref2Q9JJW6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Alyref2Q9JJW6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.23■□□□□ 0.67
Alyref2Q9JJW6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Alyref2Q9JJW6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alyref2Q9JJW6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Alyref2Q9JJW6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alyref2Q9JJW6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.21■□□□□ 0.67
Alyref2Q9JJW6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alyref2Q9JJW6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alyref2Q9JJW6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.21■□□□□ 0.67
Alyref2Q9JJW6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alyref2Q9JJW6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alyref2Q9JJW6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Gm4799-201ENSMUST00000095396 657 ntBASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alyref2Q9JJW6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alyref2Q9JJW6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Alyref2Q9JJW6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Alyref2Q9JJW6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Alyref2Q9JJW6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alyref2Q9JJW6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alyref2Q9JJW6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Alyref2Q9JJW6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alyref2Q9JJW6 Gm7332-201ENSMUST00000118351 454 ntBASIC19.18■□□□□ 0.66
Alyref2Q9JJW6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alyref2Q9JJW6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alyref2Q9JJW6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alyref2Q9JJW6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Alyref2Q9JJW6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alyref2Q9JJW6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Alyref2Q9JJW6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Gm16437-201ENSMUST00000025669 507 ntBASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Gm9806-201ENSMUST00000051080 552 ntBASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alyref2Q9JJW6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alyref2Q9JJW6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Alyref2Q9JJW6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alyref2Q9JJW6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alyref2Q9JJW6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alyref2Q9JJW6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alyref2Q9JJW6 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.13■□□□□ 0.65
Alyref2Q9JJW6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Alyref2Q9JJW6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms