Protein–RNA interactions for Protein: Q9D958

Spcs1, Signal peptidase complex subunit 1, mousemouse

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spcs1Q9D958 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spcs1Q9D958 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Spcs1Q9D958 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spcs1Q9D958 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spcs1Q9D958 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spcs1Q9D958 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spcs1Q9D958 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.77■□□□□ 0.28
Spcs1Q9D958 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Spcs1Q9D958 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Spcs1Q9D958 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Spcs1Q9D958 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spcs1Q9D958 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.77■□□□□ 0.28
Spcs1Q9D958 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spcs1Q9D958 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spcs1Q9D958 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spcs1Q9D958 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Spcs1Q9D958 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spcs1Q9D958 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Spcs1Q9D958 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spcs1Q9D958 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Spcs1Q9D958 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spcs1Q9D958 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.75■□□□□ 0.27
Spcs1Q9D958 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spcs1Q9D958 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spcs1Q9D958 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spcs1Q9D958 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.74■□□□□ 0.27
Spcs1Q9D958 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spcs1Q9D958 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spcs1Q9D958 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spcs1Q9D958 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.74■□□□□ 0.27
Spcs1Q9D958 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spcs1Q9D958 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.73■□□□□ 0.27
Spcs1Q9D958 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spcs1Q9D958 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Spcs1Q9D958 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Spcs1Q9D958 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spcs1Q9D958 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spcs1Q9D958 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Spcs1Q9D958 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spcs1Q9D958 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spcs1Q9D958 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Spcs1Q9D958 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spcs1Q9D958 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.7■□□□□ 0.26
Spcs1Q9D958 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Spcs1Q9D958 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Spcs1Q9D958 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Spcs1Q9D958 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.7■□□□□ 0.26
Spcs1Q9D958 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Spcs1Q9D958 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Spcs1Q9D958 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spcs1Q9D958 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Spcs1Q9D958 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spcs1Q9D958 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spcs1Q9D958 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Spcs1Q9D958 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Spcs1Q9D958 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spcs1Q9D958 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spcs1Q9D958 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Spcs1Q9D958 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms