Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Upk1aQ9D132 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upk1aQ9D132 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Upk1aQ9D132 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Upk1aQ9D132 Gm4799-201ENSMUST00000095396 657 ntBASIC20.57■□□□□ 0.88
Upk1aQ9D132 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Upk1aQ9D132 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1aQ9D132 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Upk1aQ9D132 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.56■□□□□ 0.88
Upk1aQ9D132 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1aQ9D132 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1aQ9D132 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1aQ9D132 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1aQ9D132 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk1aQ9D132 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk1aQ9D132 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk1aQ9D132 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Upk1aQ9D132 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Upk1aQ9D132 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk1aQ9D132 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1aQ9D132 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.54■□□□□ 0.88
Upk1aQ9D132 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.54■□□□□ 0.88
Upk1aQ9D132 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1aQ9D132 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1aQ9D132 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1aQ9D132 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.53■□□□□ 0.88
Upk1aQ9D132 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk1aQ9D132 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk1aQ9D132 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk1aQ9D132 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Upk1aQ9D132 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Upk1aQ9D132 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.52■□□□□ 0.88
Upk1aQ9D132 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk1aQ9D132 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Upk1aQ9D132 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Upk1aQ9D132 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Upk1aQ9D132 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Upk1aQ9D132 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Upk1aQ9D132 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.51■□□□□ 0.87
Upk1aQ9D132 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.51■□□□□ 0.87
Upk1aQ9D132 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Upk1aQ9D132 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Upk1aQ9D132 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1aQ9D132 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1aQ9D132 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1aQ9D132 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Upk1aQ9D132 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1aQ9D132 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1aQ9D132 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1aQ9D132 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Upk1aQ9D132 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Upk1aQ9D132 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Upk1aQ9D132 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Upk1aQ9D132 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.49■□□□□ 0.87
Upk1aQ9D132 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Upk1aQ9D132 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Upk1aQ9D132 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1aQ9D132 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upk1aQ9D132 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upk1aQ9D132 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Upk1aQ9D132 Mir3960-201ENSMUST00000198213 73 ntBASIC20.47■□□□□ 0.87
Upk1aQ9D132 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Upk1aQ9D132 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.47■□□□□ 0.87
Upk1aQ9D132 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upk1aQ9D132 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Upk1aQ9D132 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upk1aQ9D132 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk1aQ9D132 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.46■□□□□ 0.87
Upk1aQ9D132 Gm7432-201ENSMUST00000210343 879 ntBASIC20.46■□□□□ 0.87
Upk1aQ9D132 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk1aQ9D132 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.46■□□□□ 0.87
Upk1aQ9D132 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.46■□□□□ 0.87
Upk1aQ9D132 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Upk1aQ9D132 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Upk1aQ9D132 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upk1aQ9D132 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upk1aQ9D132 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Upk1aQ9D132 Terc-201ENSMUST00000082862 423 ntBASIC20.45■□□□□ 0.86
Upk1aQ9D132 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.45■□□□□ 0.86
Upk1aQ9D132 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.45■□□□□ 0.86
Upk1aQ9D132 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Upk1aQ9D132 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1aQ9D132 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1aQ9D132 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Upk1aQ9D132 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1aQ9D132 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1aQ9D132 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1aQ9D132 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Upk1aQ9D132 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upk1aQ9D132 Gm45364-201ENSMUST00000210883 159 ntBASIC20.43■□□□□ 0.86
Upk1aQ9D132 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upk1aQ9D132 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.43■□□□□ 0.86
Upk1aQ9D132 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms