Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mrpl55Q9CZ83 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mrpl55Q9CZ83 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mrpl55Q9CZ83 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.07□□□□□ -0.16
Mrpl55Q9CZ83 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.07□□□□□ -0.16
Mrpl55Q9CZ83 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mrpl55Q9CZ83 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Gm16437-201ENSMUST00000025669 507 ntBASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mrpl55Q9CZ83 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mrpl55Q9CZ83 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mrpl55Q9CZ83 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mrpl55Q9CZ83 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mrpl55Q9CZ83 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mrpl55Q9CZ83 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mrpl55Q9CZ83 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mrpl55Q9CZ83 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Gm45364-201ENSMUST00000210883 159 ntBASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mrpl55Q9CZ83 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.03□□□□□ -0.16
Mrpl55Q9CZ83 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mrpl55Q9CZ83 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mrpl55Q9CZ83 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Mrpl55Q9CZ83 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Mrpl55Q9CZ83 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mrpl55Q9CZ83 Cap2-205ENSMUST00000225824 1634 ntBASIC14.02□□□□□ -0.16
Mrpl55Q9CZ83 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Mrpl55Q9CZ83 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mrpl55Q9CZ83 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mrpl55Q9CZ83 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mrpl55Q9CZ83 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mrpl55Q9CZ83 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mrpl55Q9CZ83 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mrpl55Q9CZ83 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Mrpl55Q9CZ83 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mrpl55Q9CZ83 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mrpl55Q9CZ83 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Mrpl55Q9CZ83 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC13.99□□□□□ -0.17
Mrpl55Q9CZ83 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mrpl55Q9CZ83 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mrpl55Q9CZ83 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mrpl55Q9CZ83 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mrpl55Q9CZ83 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mrpl55Q9CZ83 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 269.5 ms