Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.56■□□□□ 0.72
Smurf1Q9CUN6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smurf1Q9CUN6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smurf1Q9CUN6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smurf1Q9CUN6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smurf1Q9CUN6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smurf1Q9CUN6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smurf1Q9CUN6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smurf1Q9CUN6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smurf1Q9CUN6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smurf1Q9CUN6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smurf1Q9CUN6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.51■□□□□ 0.71
Smurf1Q9CUN6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smurf1Q9CUN6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smurf1Q9CUN6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smurf1Q9CUN6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smurf1Q9CUN6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.49■□□□□ 0.71
Smurf1Q9CUN6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smurf1Q9CUN6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smurf1Q9CUN6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smurf1Q9CUN6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smurf1Q9CUN6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smurf1Q9CUN6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Smurf1Q9CUN6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smurf1Q9CUN6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Smurf1Q9CUN6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smurf1Q9CUN6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smurf1Q9CUN6 Gm7432-201ENSMUST00000210343 879 ntBASIC19.48■□□□□ 0.71
Smurf1Q9CUN6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smurf1Q9CUN6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smurf1Q9CUN6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smurf1Q9CUN6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smurf1Q9CUN6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smurf1Q9CUN6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.45■□□□□ 0.7
Smurf1Q9CUN6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smurf1Q9CUN6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smurf1Q9CUN6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Smurf1Q9CUN6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smurf1Q9CUN6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smurf1Q9CUN6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smurf1Q9CUN6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smurf1Q9CUN6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Smurf1Q9CUN6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smurf1Q9CUN6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smurf1Q9CUN6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.42■□□□□ 0.7
Smurf1Q9CUN6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smurf1Q9CUN6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms