Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lrrc40Q9CRC8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lrrc40Q9CRC8 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.47■■□□□ 1.03
Lrrc40Q9CRC8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Lrrc40Q9CRC8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Lrrc40Q9CRC8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc40Q9CRC8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Lrrc40Q9CRC8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Lrrc40Q9CRC8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrc40Q9CRC8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Lrrc40Q9CRC8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrc40Q9CRC8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrc40Q9CRC8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lrrc40Q9CRC8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrc40Q9CRC8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrc40Q9CRC8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Lrrc40Q9CRC8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.44■■□□□ 1.02
Lrrc40Q9CRC8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.44■■□□□ 1.02
Lrrc40Q9CRC8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Gm11175-201ENSMUST00000116172 543 ntBASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc40Q9CRC8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc40Q9CRC8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc40Q9CRC8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.42■■□□□ 1.02
Lrrc40Q9CRC8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc40Q9CRC8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc40Q9CRC8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Lrrc40Q9CRC8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrc40Q9CRC8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrc40Q9CRC8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrc40Q9CRC8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Lrrc40Q9CRC8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrc40Q9CRC8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc40Q9CRC8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc40Q9CRC8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc40Q9CRC8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc40Q9CRC8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.4■■□□□ 1.02
Lrrc40Q9CRC8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Lrrc40Q9CRC8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc40Q9CRC8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Lrrc40Q9CRC8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc40Q9CRC8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Gm14523-201ENSMUST00000117260 558 ntBASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Gm27502-201ENSMUST00000183495 199 ntBASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.38■■□□□ 1.01
Lrrc40Q9CRC8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Lrrc40Q9CRC8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrc40Q9CRC8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrc40Q9CRC8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
Lrrc40Q9CRC8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrc40Q9CRC8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Lrrc40Q9CRC8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.35■■□□□ 1.01
Lrrc40Q9CRC8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Lrrc40Q9CRC8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms