Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf111Q99ML9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf111Q99ML9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf111Q99ML9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Rnf111Q99ML9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf111Q99ML9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf111Q99ML9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rnf111Q99ML9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.89■□□□□ 0.94
Rnf111Q99ML9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Rnf111Q99ML9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf111Q99ML9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Rnf111Q99ML9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf111Q99ML9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf111Q99ML9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.88■□□□□ 0.93
Rnf111Q99ML9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.88■□□□□ 0.93
Rnf111Q99ML9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.88■□□□□ 0.93
Rnf111Q99ML9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf111Q99ML9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rnf111Q99ML9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf111Q99ML9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf111Q99ML9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf111Q99ML9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.87■□□□□ 0.93
Rnf111Q99ML9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.86■□□□□ 0.93
Rnf111Q99ML9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf111Q99ML9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf111Q99ML9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf111Q99ML9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.86■□□□□ 0.93
Rnf111Q99ML9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf111Q99ML9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf111Q99ML9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf111Q99ML9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf111Q99ML9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.85■□□□□ 0.93
Rnf111Q99ML9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf111Q99ML9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.84■□□□□ 0.93
Rnf111Q99ML9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf111Q99ML9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf111Q99ML9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.84■□□□□ 0.93
Rnf111Q99ML9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rnf111Q99ML9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf111Q99ML9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rnf111Q99ML9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rnf111Q99ML9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.83■□□□□ 0.92
Rnf111Q99ML9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf111Q99ML9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.82■□□□□ 0.92
Rnf111Q99ML9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf111Q99ML9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf111Q99ML9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rnf111Q99ML9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf111Q99ML9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf111Q99ML9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf111Q99ML9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf111Q99ML9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf111Q99ML9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf111Q99ML9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf111Q99ML9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf111Q99ML9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.81■□□□□ 0.92
Rnf111Q99ML9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Rnf111Q99ML9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rnf111Q99ML9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf111Q99ML9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf111Q99ML9 Gm44428-201ENSMUST00000204474 874 ntBASIC20.8■□□□□ 0.92
Rnf111Q99ML9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf111Q99ML9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf111Q99ML9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.8■□□□□ 0.92
Rnf111Q99ML9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.79■□□□□ 0.92
Rnf111Q99ML9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf111Q99ML9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rnf111Q99ML9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf111Q99ML9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.78■□□□□ 0.92
Rnf111Q99ML9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.77■□□□□ 0.92
Rnf111Q99ML9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf111Q99ML9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf111Q99ML9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf111Q99ML9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf111Q99ML9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Rnf111Q99ML9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Rnf111Q99ML9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf111Q99ML9 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.76■□□□□ 0.91
Rnf111Q99ML9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf111Q99ML9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf111Q99ML9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf111Q99ML9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rnf111Q99ML9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf111Q99ML9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Rnf111Q99ML9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf111Q99ML9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms