Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdha2Q91Y17 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.27■■□□□ 1.32
Pcdha2Q91Y17 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Pcdha2Q91Y17 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdha2Q91Y17 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdha2Q91Y17 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdha2Q91Y17 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Gm45444-201ENSMUST00000211394 898 ntBASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdha2Q91Y17 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdha2Q91Y17 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdha2Q91Y17 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdha2Q91Y17 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.25■■□□□ 1.31
Pcdha2Q91Y17 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdha2Q91Y17 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdha2Q91Y17 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdha2Q91Y17 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Pcdha2Q91Y17 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdha2Q91Y17 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdha2Q91Y17 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdha2Q91Y17 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.24■■□□□ 1.31
Pcdha2Q91Y17 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdha2Q91Y17 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdha2Q91Y17 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Pcdha2Q91Y17 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdha2Q91Y17 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdha2Q91Y17 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.23■■□□□ 1.31
Pcdha2Q91Y17 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdha2Q91Y17 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdha2Q91Y17 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdha2Q91Y17 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdha2Q91Y17 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdha2Q91Y17 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdha2Q91Y17 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdha2Q91Y17 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.21■■□□□ 1.31
Pcdha2Q91Y17 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdha2Q91Y17 Gm43566-201ENSMUST00000196851 808 ntBASIC23.21■■□□□ 1.31
Pcdha2Q91Y17 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.21■■□□□ 1.31
Pcdha2Q91Y17 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Pcdha2Q91Y17 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcdha2Q91Y17 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdha2Q91Y17 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdha2Q91Y17 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdha2Q91Y17 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdha2Q91Y17 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Pcdha2Q91Y17 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdha2Q91Y17 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.19■■□□□ 1.3
Pcdha2Q91Y17 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdha2Q91Y17 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdha2Q91Y17 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Pcdha2Q91Y17 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdha2Q91Y17 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdha2Q91Y17 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.17■■□□□ 1.3
Pcdha2Q91Y17 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdha2Q91Y17 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdha2Q91Y17 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdha2Q91Y17 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdha2Q91Y17 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdha2Q91Y17 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdha2Q91Y17 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdha2Q91Y17 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdha2Q91Y17 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.15■■□□□ 1.3
Pcdha2Q91Y17 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdha2Q91Y17 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdha2Q91Y17 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Pcdha2Q91Y17 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdha2Q91Y17 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdha2Q91Y17 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Pcdha2Q91Y17 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.14■■□□□ 1.29
Pcdha2Q91Y17 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdha2Q91Y17 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.14■■□□□ 1.29
Pcdha2Q91Y17 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Pcdha2Q91Y17 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Pcdha2Q91Y17 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.14■■□□□ 1.29
Pcdha2Q91Y17 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdha2Q91Y17 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdha2Q91Y17 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdha2Q91Y17 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Pcdha2Q91Y17 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdha2Q91Y17 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.12■■□□□ 1.29
Pcdha2Q91Y17 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdha2Q91Y17 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdha2Q91Y17 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms