Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb3Q91XZ7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb3Q91XZ7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb3Q91XZ7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb3Q91XZ7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb3Q91XZ7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhb3Q91XZ7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb3Q91XZ7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb3Q91XZ7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb3Q91XZ7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb3Q91XZ7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb3Q91XZ7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb3Q91XZ7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb3Q91XZ7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb3Q91XZ7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.4■■□□□ 1.02
Pcdhb3Q91XZ7 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.4■■□□□ 1.02
Pcdhb3Q91XZ7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb3Q91XZ7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb3Q91XZ7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.39■■□□□ 1.02
Pcdhb3Q91XZ7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb3Q91XZ7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb3Q91XZ7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb3Q91XZ7 Mir6538-201ENSMUST00000183713 110 ntBASIC21.39■■□□□ 1.01
Pcdhb3Q91XZ7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhb3Q91XZ7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdhb3Q91XZ7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.38■■□□□ 1.01
Pcdhb3Q91XZ7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb3Q91XZ7 Gm37136-201ENSMUST00000194368 194 ntBASIC21.38■■□□□ 1.01
Pcdhb3Q91XZ7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb3Q91XZ7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb3Q91XZ7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
Pcdhb3Q91XZ7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb3Q91XZ7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Gm11175-201ENSMUST00000116172 543 ntBASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Gm6311-201ENSMUST00000073790 878 ntBASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb3Q91XZ7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb3Q91XZ7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb3Q91XZ7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb3Q91XZ7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb3Q91XZ7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb3Q91XZ7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb3Q91XZ7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb3Q91XZ7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pcdhb3Q91XZ7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Gm4799-201ENSMUST00000095396 657 ntBASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb3Q91XZ7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb3Q91XZ7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pcdhb3Q91XZ7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb3Q91XZ7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb3Q91XZ7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb3Q91XZ7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb3Q91XZ7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.31■■□□□ 1
Pcdhb3Q91XZ7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb3Q91XZ7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pcdhb3Q91XZ7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhb3Q91XZ7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb3Q91XZ7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb3Q91XZ7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb3Q91XZ7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb3Q91XZ7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb3Q91XZ7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb3Q91XZ7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb3Q91XZ7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pcdhb3Q91XZ7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms