Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Odf4Q8VI88 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Odf4Q8VI88 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Odf4Q8VI88 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Odf4Q8VI88 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.12■□□□□ 0.65
Odf4Q8VI88 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Odf4Q8VI88 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.12■□□□□ 0.65
Odf4Q8VI88 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Odf4Q8VI88 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Odf4Q8VI88 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Odf4Q8VI88 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Odf4Q8VI88 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Odf4Q8VI88 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Odf4Q8VI88 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Odf4Q8VI88 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Odf4Q8VI88 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Odf4Q8VI88 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Odf4Q8VI88 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Odf4Q8VI88 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Odf4Q8VI88 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Odf4Q8VI88 Gm44428-201ENSMUST00000204474 874 ntBASIC19.08■□□□□ 0.64
Odf4Q8VI88 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Odf4Q8VI88 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.07■□□□□ 0.64
Odf4Q8VI88 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.07■□□□□ 0.64
Odf4Q8VI88 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Odf4Q8VI88 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Odf4Q8VI88 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Odf4Q8VI88 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.05■□□□□ 0.64
Odf4Q8VI88 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.05■□□□□ 0.64
Odf4Q8VI88 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Odf4Q8VI88 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Odf4Q8VI88 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.05■□□□□ 0.64
Odf4Q8VI88 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Odf4Q8VI88 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.05■□□□□ 0.64
Odf4Q8VI88 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Odf4Q8VI88 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Odf4Q8VI88 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.04■□□□□ 0.64
Odf4Q8VI88 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Odf4Q8VI88 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Odf4Q8VI88 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Odf4Q8VI88 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Odf4Q8VI88 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Odf4Q8VI88 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Odf4Q8VI88 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Odf4Q8VI88 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Odf4Q8VI88 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Odf4Q8VI88 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Odf4Q8VI88 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Odf4Q8VI88 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Odf4Q8VI88 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Odf4Q8VI88 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.01■□□□□ 0.63
Odf4Q8VI88 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Odf4Q8VI88 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.01■□□□□ 0.63
Odf4Q8VI88 Gm6934-201ENSMUST00000194780 1905 ntBASIC19■□□□□ 0.63
Odf4Q8VI88 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Odf4Q8VI88 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Odf4Q8VI88 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Odf4Q8VI88 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.99■□□□□ 0.63
Odf4Q8VI88 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Odf4Q8VI88 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Odf4Q8VI88 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.98■□□□□ 0.63
Odf4Q8VI88 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Odf4Q8VI88 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Odf4Q8VI88 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.98■□□□□ 0.63
Odf4Q8VI88 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Odf4Q8VI88 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Odf4Q8VI88 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Odf4Q8VI88 Gm5921-201ENSMUST00000075898 882 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms