Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm11599-201ENSMUST00000118720 878 ntBASIC20.67■□□□□ 0.9
Pcdh18Q8VHR0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdh18Q8VHR0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh18Q8VHR0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh18Q8VHR0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdh18Q8VHR0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh18Q8VHR0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh18Q8VHR0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh18Q8VHR0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh18Q8VHR0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh18Q8VHR0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh18Q8VHR0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pcdh18Q8VHR0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.64■□□□□ 0.9
Pcdh18Q8VHR0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh18Q8VHR0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pcdh18Q8VHR0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh18Q8VHR0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.64■□□□□ 0.89
Pcdh18Q8VHR0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh18Q8VHR0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdh18Q8VHR0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh18Q8VHR0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh18Q8VHR0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcdh18Q8VHR0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdh18Q8VHR0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh18Q8VHR0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh18Q8VHR0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdh18Q8VHR0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdh18Q8VHR0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.62■□□□□ 0.89
Pcdh18Q8VHR0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdh18Q8VHR0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh18Q8VHR0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh18Q8VHR0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh18Q8VHR0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh18Q8VHR0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdh18Q8VHR0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh18Q8VHR0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh18Q8VHR0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh18Q8VHR0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh18Q8VHR0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdh18Q8VHR0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh18Q8VHR0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh18Q8VHR0 Gm9812-201ENSMUST00000061934 968 ntBASIC20.59■□□□□ 0.89
Pcdh18Q8VHR0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh18Q8VHR0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh18Q8VHR0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh18Q8VHR0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh18Q8VHR0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh18Q8VHR0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh18Q8VHR0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.57■□□□□ 0.88
Pcdh18Q8VHR0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh18Q8VHR0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.57■□□□□ 0.88
Pcdh18Q8VHR0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.57■□□□□ 0.88
Pcdh18Q8VHR0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.57■□□□□ 0.88
Pcdh18Q8VHR0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh18Q8VHR0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh18Q8VHR0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh18Q8VHR0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh18Q8VHR0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh18Q8VHR0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Pcdh18Q8VHR0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh18Q8VHR0 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.55■□□□□ 0.88
Pcdh18Q8VHR0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh18Q8VHR0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh18Q8VHR0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh18Q8VHR0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh18Q8VHR0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh18Q8VHR0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh18Q8VHR0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdh18Q8VHR0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh18Q8VHR0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Pcdh18Q8VHR0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh18Q8VHR0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.52■□□□□ 0.87
Pcdh18Q8VHR0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Gm45364-201ENSMUST00000210883 159 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms