Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf8Q8VC56 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf8Q8VC56 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf8Q8VC56 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf8Q8VC56 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf8Q8VC56 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf8Q8VC56 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf8Q8VC56 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf8Q8VC56 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf8Q8VC56 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf8Q8VC56 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf8Q8VC56 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.65■□□□□ 0.9
Rnf8Q8VC56 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf8Q8VC56 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf8Q8VC56 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf8Q8VC56 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf8Q8VC56 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf8Q8VC56 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf8Q8VC56 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf8Q8VC56 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf8Q8VC56 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf8Q8VC56 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf8Q8VC56 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf8Q8VC56 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.63■□□□□ 0.89
Rnf8Q8VC56 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf8Q8VC56 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf8Q8VC56 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf8Q8VC56 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf8Q8VC56 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf8Q8VC56 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rnf8Q8VC56 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf8Q8VC56 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf8Q8VC56 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf8Q8VC56 Gm44428-201ENSMUST00000204474 874 ntBASIC20.62■□□□□ 0.89
Rnf8Q8VC56 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf8Q8VC56 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf8Q8VC56 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf8Q8VC56 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf8Q8VC56 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf8Q8VC56 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf8Q8VC56 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf8Q8VC56 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.6■□□□□ 0.89
Rnf8Q8VC56 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf8Q8VC56 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf8Q8VC56 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf8Q8VC56 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf8Q8VC56 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf8Q8VC56 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.58■□□□□ 0.89
Rnf8Q8VC56 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf8Q8VC56 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf8Q8VC56 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.57■□□□□ 0.88
Rnf8Q8VC56 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf8Q8VC56 Cap2-205ENSMUST00000225824 1634 ntBASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Gm12366-201ENSMUST00000121722 873 ntBASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Gm5786-201ENSMUST00000085368 882 ntBASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf8Q8VC56 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf8Q8VC56 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf8Q8VC56 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf8Q8VC56 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf8Q8VC56 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf8Q8VC56 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf8Q8VC56 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rnf8Q8VC56 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf8Q8VC56 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.54■□□□□ 0.88
Rnf8Q8VC56 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf8Q8VC56 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf8Q8VC56 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms