Protein–RNA interactions for Protein: Q8R2G6

Ccdc80, Coiled-coil domain-containing protein 80, mousemouse

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc80Q8R2G6 Gm12504-201ENSMUST00000120860 2231 ntBASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Gm42809-201ENSMUST00000198429 1138 ntBASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc80Q8R2G6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc80Q8R2G6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc80Q8R2G6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc80Q8R2G6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
Ccdc80Q8R2G6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc80Q8R2G6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc80Q8R2G6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc80Q8R2G6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc80Q8R2G6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc80Q8R2G6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc80Q8R2G6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.96■□□□□ 0.95
Ccdc80Q8R2G6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc80Q8R2G6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.95■□□□□ 0.95
Ccdc80Q8R2G6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.95■□□□□ 0.94
Ccdc80Q8R2G6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ccdc80Q8R2G6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc80Q8R2G6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc80Q8R2G6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc80Q8R2G6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc80Q8R2G6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc80Q8R2G6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc80Q8R2G6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc80Q8R2G6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc80Q8R2G6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc80Q8R2G6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc80Q8R2G6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc80Q8R2G6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc80Q8R2G6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc80Q8R2G6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc80Q8R2G6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc80Q8R2G6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc80Q8R2G6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc80Q8R2G6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc80Q8R2G6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc80Q8R2G6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc80Q8R2G6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc80Q8R2G6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc80Q8R2G6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccdc80Q8R2G6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc80Q8R2G6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc80Q8R2G6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc80Q8R2G6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc80Q8R2G6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc80Q8R2G6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc80Q8R2G6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc80Q8R2G6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc80Q8R2G6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Ccdc80Q8R2G6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc80Q8R2G6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.87■□□□□ 0.93
Ccdc80Q8R2G6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc80Q8R2G6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc80Q8R2G6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc80Q8R2G6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc80Q8R2G6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc80Q8R2G6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc80Q8R2G6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.85■□□□□ 0.93
Ccdc80Q8R2G6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ccdc80Q8R2G6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc80Q8R2G6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc80Q8R2G6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc80Q8R2G6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc80Q8R2G6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc80Q8R2G6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc80Q8R2G6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc80Q8R2G6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc80Q8R2G6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc80Q8R2G6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc80Q8R2G6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ccdc80Q8R2G6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc80Q8R2G6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc80Q8R2G6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc80Q8R2G6 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.82■□□□□ 0.92
Ccdc80Q8R2G6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc80Q8R2G6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc80Q8R2G6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc80Q8R2G6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc80Q8R2G6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc80Q8R2G6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms