Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tm6sf2Q8R1J1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.31■□□□□ 0.84
Tm6sf2Q8R1J1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.31■□□□□ 0.84
Tm6sf2Q8R1J1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tm6sf2Q8R1J1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tm6sf2Q8R1J1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tm6sf2Q8R1J1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tm6sf2Q8R1J1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tm6sf2Q8R1J1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tm6sf2Q8R1J1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Tm6sf2Q8R1J1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.3■□□□□ 0.84
Tm6sf2Q8R1J1 Gm5812-201ENSMUST00000061073 957 ntBASIC20.3■□□□□ 0.84
Tm6sf2Q8R1J1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.3■□□□□ 0.84
Tm6sf2Q8R1J1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Gm22567-201ENSMUST00000175542 342 ntBASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tm6sf2Q8R1J1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tm6sf2Q8R1J1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tm6sf2Q8R1J1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tm6sf2Q8R1J1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.26■□□□□ 0.83
Tm6sf2Q8R1J1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tm6sf2Q8R1J1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tm6sf2Q8R1J1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.26■□□□□ 0.83
Tm6sf2Q8R1J1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tm6sf2Q8R1J1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tm6sf2Q8R1J1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tm6sf2Q8R1J1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tm6sf2Q8R1J1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tm6sf2Q8R1J1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.25■□□□□ 0.83
Tm6sf2Q8R1J1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tm6sf2Q8R1J1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tm6sf2Q8R1J1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tm6sf2Q8R1J1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.24■□□□□ 0.83
Tm6sf2Q8R1J1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tm6sf2Q8R1J1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tm6sf2Q8R1J1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tm6sf2Q8R1J1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tm6sf2Q8R1J1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tm6sf2Q8R1J1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tm6sf2Q8R1J1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tm6sf2Q8R1J1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tm6sf2Q8R1J1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tm6sf2Q8R1J1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tm6sf2Q8R1J1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tm6sf2Q8R1J1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tm6sf2Q8R1J1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tm6sf2Q8R1J1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tm6sf2Q8R1J1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tm6sf2Q8R1J1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tm6sf2Q8R1J1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tm6sf2Q8R1J1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tm6sf2Q8R1J1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm6sf2Q8R1J1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.17■□□□□ 0.82
Tm6sf2Q8R1J1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms