Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Gm5812-201ENSMUST00000061073 957 ntBASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpp40Q8R1F9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpp40Q8R1F9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpp40Q8R1F9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpp40Q8R1F9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Rpp40Q8R1F9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Rpp40Q8R1F9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.25■■□□□ 1.31
Rpp40Q8R1F9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpp40Q8R1F9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Gm15546-201ENSMUST00000122095 826 ntBASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Rpp40Q8R1F9 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.15■■□□□ 1.3
Rpp40Q8R1F9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Rpp40Q8R1F9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpp40Q8R1F9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpp40Q8R1F9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms