Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Vcpip1Q8CDG3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vcpip1Q8CDG3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.19■■□□□ 1.3
Vcpip1Q8CDG3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Vcpip1Q8CDG3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vcpip1Q8CDG3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vcpip1Q8CDG3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Vcpip1Q8CDG3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Vcpip1Q8CDG3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vcpip1Q8CDG3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.17■■□□□ 1.3
Vcpip1Q8CDG3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vcpip1Q8CDG3 Gm16437-201ENSMUST00000025669 507 ntBASIC23.17■■□□□ 1.3
Vcpip1Q8CDG3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vcpip1Q8CDG3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vcpip1Q8CDG3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vcpip1Q8CDG3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vcpip1Q8CDG3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
Vcpip1Q8CDG3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vcpip1Q8CDG3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Vcpip1Q8CDG3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vcpip1Q8CDG3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vcpip1Q8CDG3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vcpip1Q8CDG3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Vcpip1Q8CDG3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Vcpip1Q8CDG3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Vcpip1Q8CDG3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vcpip1Q8CDG3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vcpip1Q8CDG3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vcpip1Q8CDG3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vcpip1Q8CDG3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Vcpip1Q8CDG3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.13■■□□□ 1.29
Vcpip1Q8CDG3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.12■■□□□ 1.29
Vcpip1Q8CDG3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Vcpip1Q8CDG3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vcpip1Q8CDG3 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.12■■□□□ 1.29
Vcpip1Q8CDG3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vcpip1Q8CDG3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vcpip1Q8CDG3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Vcpip1Q8CDG3 Gm11687-201ENSMUST00000118911 886 ntBASIC23.11■■□□□ 1.29
Vcpip1Q8CDG3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Vcpip1Q8CDG3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.11■■□□□ 1.29
Vcpip1Q8CDG3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Vcpip1Q8CDG3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.1■■□□□ 1.29
Vcpip1Q8CDG3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vcpip1Q8CDG3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Vcpip1Q8CDG3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vcpip1Q8CDG3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.09■■□□□ 1.29
Vcpip1Q8CDG3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.09■■□□□ 1.29
Vcpip1Q8CDG3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.09■■□□□ 1.29
Vcpip1Q8CDG3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.09■■□□□ 1.29
Vcpip1Q8CDG3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Vcpip1Q8CDG3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Vcpip1Q8CDG3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Vcpip1Q8CDG3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.08■■□□□ 1.28
Vcpip1Q8CDG3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Vcpip1Q8CDG3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Vcpip1Q8CDG3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.07■■□□□ 1.28
Vcpip1Q8CDG3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vcpip1Q8CDG3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vcpip1Q8CDG3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vcpip1Q8CDG3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Vcpip1Q8CDG3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vcpip1Q8CDG3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vcpip1Q8CDG3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Vcpip1Q8CDG3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vcpip1Q8CDG3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.05■■□□□ 1.28
Vcpip1Q8CDG3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vcpip1Q8CDG3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vcpip1Q8CDG3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vcpip1Q8CDG3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Vcpip1Q8CDG3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vcpip1Q8CDG3 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.04■■□□□ 1.28
Vcpip1Q8CDG3 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.04■■□□□ 1.28
Vcpip1Q8CDG3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vcpip1Q8CDG3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Vcpip1Q8CDG3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vcpip1Q8CDG3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.03■■□□□ 1.28
Vcpip1Q8CDG3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vcpip1Q8CDG3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vcpip1Q8CDG3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Vcpip1Q8CDG3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vcpip1Q8CDG3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Vcpip1Q8CDG3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Vcpip1Q8CDG3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.02■■□□□ 1.28
Vcpip1Q8CDG3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Vcpip1Q8CDG3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms