Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
Rtp1Q8C8C1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rtp1Q8C8C1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rtp1Q8C8C1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Rtp1Q8C8C1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
Rtp1Q8C8C1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.08■■□□□ 1.61
Rtp1Q8C8C1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.08■■□□□ 1.61
Rtp1Q8C8C1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rtp1Q8C8C1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rtp1Q8C8C1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC25.07■■□□□ 1.6
Rtp1Q8C8C1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.07■■□□□ 1.6
Rtp1Q8C8C1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.07■■□□□ 1.6
Rtp1Q8C8C1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rtp1Q8C8C1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rtp1Q8C8C1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Rtp1Q8C8C1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.06■■□□□ 1.6
Rtp1Q8C8C1 Gm8495-201ENSMUST00000188740 694 ntBASIC25.06■■□□□ 1.6
Rtp1Q8C8C1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtp1Q8C8C1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.05■■□□□ 1.6
Rtp1Q8C8C1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtp1Q8C8C1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
Rtp1Q8C8C1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtp1Q8C8C1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtp1Q8C8C1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtp1Q8C8C1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtp1Q8C8C1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rtp1Q8C8C1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtp1Q8C8C1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.03■■□□□ 1.6
Rtp1Q8C8C1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rtp1Q8C8C1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtp1Q8C8C1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtp1Q8C8C1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtp1Q8C8C1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rtp1Q8C8C1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.02■■□□□ 1.6
Rtp1Q8C8C1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Rtp1Q8C8C1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rtp1Q8C8C1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rtp1Q8C8C1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rtp1Q8C8C1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rtp1Q8C8C1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.01■■□□□ 1.59
Rtp1Q8C8C1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.01■■□□□ 1.59
Rtp1Q8C8C1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25■■□□□ 1.59
Rtp1Q8C8C1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
Rtp1Q8C8C1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25■■□□□ 1.59
Rtp1Q8C8C1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Golgb1-201ENSMUST00000023534 498 ntBASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rtp1Q8C8C1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.98■■□□□ 1.59
Rtp1Q8C8C1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.98■■□□□ 1.59
Rtp1Q8C8C1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
Rtp1Q8C8C1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rtp1Q8C8C1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rtp1Q8C8C1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Gm18284-201ENSMUST00000172604 624 ntBASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Gm10399-202ENSMUST00000202768 748 ntBASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rtp1Q8C8C1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rtp1Q8C8C1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Rtp1Q8C8C1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rtp1Q8C8C1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.95■■□□□ 1.58
Rtp1Q8C8C1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rtp1Q8C8C1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rtp1Q8C8C1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rtp1Q8C8C1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rtp1Q8C8C1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rtp1Q8C8C1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rtp1Q8C8C1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.94■■□□□ 1.58
Rtp1Q8C8C1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rtp1Q8C8C1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Rtp1Q8C8C1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rtp1Q8C8C1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rtp1Q8C8C1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rtp1Q8C8C1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rtp1Q8C8C1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rtp1Q8C8C1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rtp1Q8C8C1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rtp1Q8C8C1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rtp1Q8C8C1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Rtp1Q8C8C1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.91■■□□□ 1.58
Rtp1Q8C8C1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms