Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.71■□□□□ 0.75
Col6a6Q8C6K9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a6Q8C6K9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col6a6Q8C6K9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.7■□□□□ 0.74
Col6a6Q8C6K9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a6Q8C6K9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.7■□□□□ 0.74
Col6a6Q8C6K9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Col6a6Q8C6K9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a6Q8C6K9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a6Q8C6K9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a6Q8C6K9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.69■□□□□ 0.74
Col6a6Q8C6K9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a6Q8C6K9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.69■□□□□ 0.74
Col6a6Q8C6K9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a6Q8C6K9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a6Q8C6K9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a6Q8C6K9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col6a6Q8C6K9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Col6a6Q8C6K9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a6Q8C6K9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a6Q8C6K9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a6Q8C6K9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a6Q8C6K9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a6Q8C6K9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a6Q8C6K9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a6Q8C6K9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a6Q8C6K9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a6Q8C6K9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a6Q8C6K9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.65■□□□□ 0.74
Col6a6Q8C6K9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.65■□□□□ 0.74
Col6a6Q8C6K9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a6Q8C6K9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Col6a6Q8C6K9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col6a6Q8C6K9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a6Q8C6K9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a6Q8C6K9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col6a6Q8C6K9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a6Q8C6K9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Col6a6Q8C6K9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col6a6Q8C6K9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a6Q8C6K9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Col6a6Q8C6K9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col6a6Q8C6K9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a6Q8C6K9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a6Q8C6K9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a6Q8C6K9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a6Q8C6K9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a6Q8C6K9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a6Q8C6K9 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.6■□□□□ 0.73
Col6a6Q8C6K9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.6■□□□□ 0.73
Col6a6Q8C6K9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a6Q8C6K9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a6Q8C6K9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a6Q8C6K9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a6Q8C6K9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col6a6Q8C6K9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Col6a6Q8C6K9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col6a6Q8C6K9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a6Q8C6K9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a6Q8C6K9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a6Q8C6K9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a6Q8C6K9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a6Q8C6K9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a6Q8C6K9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a6Q8C6K9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a6Q8C6K9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a6Q8C6K9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a6Q8C6K9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a6Q8C6K9 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.56■□□□□ 0.72
Col6a6Q8C6K9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms