Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
Prpf18Q8BM39 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Prpf18Q8BM39 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf18Q8BM39 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf18Q8BM39 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Prpf18Q8BM39 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf18Q8BM39 Gm11599-201ENSMUST00000118720 878 ntBASIC20.39■□□□□ 0.85
Prpf18Q8BM39 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.39■□□□□ 0.85
Prpf18Q8BM39 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf18Q8BM39 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Prpf18Q8BM39 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Notumos-201ENSMUST00000151998 2659 ntBASIC20.38■□□□□ 0.85
Prpf18Q8BM39 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf18Q8BM39 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Prpf18Q8BM39 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.37■□□□□ 0.85
Prpf18Q8BM39 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf18Q8BM39 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf18Q8BM39 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf18Q8BM39 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf18Q8BM39 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf18Q8BM39 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Prpf18Q8BM39 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf18Q8BM39 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.35■□□□□ 0.85
Prpf18Q8BM39 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf18Q8BM39 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Prpf18Q8BM39 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Prpf18Q8BM39 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf18Q8BM39 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf18Q8BM39 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Prpf18Q8BM39 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf18Q8BM39 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.34■□□□□ 0.85
Prpf18Q8BM39 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Prpf18Q8BM39 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf18Q8BM39 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf18Q8BM39 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf18Q8BM39 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Prpf18Q8BM39 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf18Q8BM39 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf18Q8BM39 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf18Q8BM39 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf18Q8BM39 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Prpf18Q8BM39 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf18Q8BM39 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Prpf18Q8BM39 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Prpf18Q8BM39 Mir3960-201ENSMUST00000198213 73 ntBASIC20.31■□□□□ 0.84
Prpf18Q8BM39 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf18Q8BM39 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf18Q8BM39 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.3■□□□□ 0.84
Prpf18Q8BM39 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.3■□□□□ 0.84
Prpf18Q8BM39 Gm9812-201ENSMUST00000061934 968 ntBASIC20.3■□□□□ 0.84
Prpf18Q8BM39 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf18Q8BM39 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.29■□□□□ 0.84
Prpf18Q8BM39 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.29■□□□□ 0.84
Prpf18Q8BM39 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.29■□□□□ 0.84
Prpf18Q8BM39 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Prpf18Q8BM39 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Prpf18Q8BM39 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf18Q8BM39 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf18Q8BM39 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf18Q8BM39 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf18Q8BM39 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf18Q8BM39 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf18Q8BM39 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Prpf18Q8BM39 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf18Q8BM39 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf18Q8BM39 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.27■□□□□ 0.84
Prpf18Q8BM39 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf18Q8BM39 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf18Q8BM39 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf18Q8BM39 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.26■□□□□ 0.83
Prpf18Q8BM39 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf18Q8BM39 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
Prpf18Q8BM39 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.26■□□□□ 0.83
Prpf18Q8BM39 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prpf18Q8BM39 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf18Q8BM39 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf18Q8BM39 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf18Q8BM39 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms