Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sptlc3Q8BG54 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sptlc3Q8BG54 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Sptlc3Q8BG54 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.16■■□□□ 1.78
Sptlc3Q8BG54 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Sptlc3Q8BG54 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sptlc3Q8BG54 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sptlc3Q8BG54 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.15■■□□□ 1.78
Sptlc3Q8BG54 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sptlc3Q8BG54 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sptlc3Q8BG54 Gm14117-201ENSMUST00000122417 843 ntBASIC26.15■■□□□ 1.78
Sptlc3Q8BG54 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sptlc3Q8BG54 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.14■■□□□ 1.78
Sptlc3Q8BG54 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sptlc3Q8BG54 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.14■■□□□ 1.77
Sptlc3Q8BG54 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sptlc3Q8BG54 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sptlc3Q8BG54 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sptlc3Q8BG54 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sptlc3Q8BG54 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
Sptlc3Q8BG54 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sptlc3Q8BG54 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Sptlc3Q8BG54 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sptlc3Q8BG54 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sptlc3Q8BG54 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sptlc3Q8BG54 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sptlc3Q8BG54 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sptlc3Q8BG54 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Sptlc3Q8BG54 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sptlc3Q8BG54 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sptlc3Q8BG54 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.1■■□□□ 1.77
Sptlc3Q8BG54 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sptlc3Q8BG54 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sptlc3Q8BG54 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sptlc3Q8BG54 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sptlc3Q8BG54 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Sptlc3Q8BG54 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Sptlc3Q8BG54 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.08■■□□□ 1.77
Sptlc3Q8BG54 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Sptlc3Q8BG54 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.07■■□□□ 1.76
Sptlc3Q8BG54 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sptlc3Q8BG54 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sptlc3Q8BG54 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sptlc3Q8BG54 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.07■■□□□ 1.76
Sptlc3Q8BG54 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.07■■□□□ 1.76
Sptlc3Q8BG54 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.07■■□□□ 1.76
Sptlc3Q8BG54 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Sptlc3Q8BG54 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sptlc3Q8BG54 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sptlc3Q8BG54 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Sptlc3Q8BG54 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sptlc3Q8BG54 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.05■■□□□ 1.76
Sptlc3Q8BG54 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.05■■□□□ 1.76
Sptlc3Q8BG54 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Sptlc3Q8BG54 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sptlc3Q8BG54 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.04■■□□□ 1.76
Sptlc3Q8BG54 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sptlc3Q8BG54 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.04■■□□□ 1.76
Sptlc3Q8BG54 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Sptlc3Q8BG54 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.04■■□□□ 1.76
Sptlc3Q8BG54 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sptlc3Q8BG54 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sptlc3Q8BG54 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Sptlc3Q8BG54 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sptlc3Q8BG54 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.03■■□□□ 1.76
Sptlc3Q8BG54 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.03■■□□□ 1.76
Sptlc3Q8BG54 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sptlc3Q8BG54 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sptlc3Q8BG54 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Sptlc3Q8BG54 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sptlc3Q8BG54 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.02■■□□□ 1.76
Sptlc3Q8BG54 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Sptlc3Q8BG54 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sptlc3Q8BG54 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sptlc3Q8BG54 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.01■■□□□ 1.75
Sptlc3Q8BG54 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Sptlc3Q8BG54 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sptlc3Q8BG54 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sptlc3Q8BG54 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sptlc3Q8BG54 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sptlc3Q8BG54 Gm5131-201ENSMUST00000212776 1238 ntBASIC26■■□□□ 1.75
Sptlc3Q8BG54 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sptlc3Q8BG54 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.99■■□□□ 1.75
Sptlc3Q8BG54 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sptlc3Q8BG54 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.99■■□□□ 1.75
Sptlc3Q8BG54 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sptlc3Q8BG54 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sptlc3Q8BG54 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sptlc3Q8BG54 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
Sptlc3Q8BG54 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.98■■□□□ 1.75
Sptlc3Q8BG54 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sptlc3Q8BG54 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sptlc3Q8BG54 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sptlc3Q8BG54 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sptlc3Q8BG54 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.97■■□□□ 1.75
Sptlc3Q8BG54 Etf1-202ENSMUST00000180351 108 ntBASIC25.97■■□□□ 1.75
Sptlc3Q8BG54 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sptlc3Q8BG54 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.97■■□□□ 1.75
Sptlc3Q8BG54 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sptlc3Q8BG54 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms