Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc116Q80X53 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccdc116Q80X53 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc116Q80X53 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccdc116Q80X53 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc116Q80X53 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc116Q80X53 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc116Q80X53 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc116Q80X53 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc116Q80X53 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc116Q80X53 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc116Q80X53 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc116Q80X53 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ccdc116Q80X53 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc116Q80X53 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc116Q80X53 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.19■□□□□ 0.98
Ccdc116Q80X53 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc116Q80X53 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Ccdc116Q80X53 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc116Q80X53 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc116Q80X53 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.17■□□□□ 0.98
Ccdc116Q80X53 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc116Q80X53 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ccdc116Q80X53 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc116Q80X53 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc116Q80X53 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc116Q80X53 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc116Q80X53 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc116Q80X53 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc116Q80X53 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccdc116Q80X53 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc116Q80X53 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc116Q80X53 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc116Q80X53 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc116Q80X53 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Ccdc116Q80X53 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc116Q80X53 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc116Q80X53 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc116Q80X53 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc116Q80X53 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc116Q80X53 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc116Q80X53 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc116Q80X53 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc116Q80X53 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc116Q80X53 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc116Q80X53 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc116Q80X53 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc116Q80X53 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc116Q80X53 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Gm14523-201ENSMUST00000117260 558 ntBASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc116Q80X53 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc116Q80X53 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc116Q80X53 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc116Q80X53 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc116Q80X53 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc116Q80X53 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc116Q80X53 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc116Q80X53 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc116Q80X53 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc116Q80X53 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.07■□□□□ 0.96
Ccdc116Q80X53 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc116Q80X53 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc116Q80X53 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.07■□□□□ 0.96
Ccdc116Q80X53 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc116Q80X53 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc116Q80X53 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc116Q80X53 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.06■□□□□ 0.96
Ccdc116Q80X53 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc116Q80X53 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc116Q80X53 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc116Q80X53 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms