Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Prpf40bQ80W14 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Prpf40bQ80W14 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
Prpf40bQ80W14 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Prpf40bQ80W14 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Prpf40bQ80W14 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Prpf40bQ80W14 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Prpf40bQ80W14 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Prpf40bQ80W14 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Prpf40bQ80W14 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Prpf40bQ80W14 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Prpf40bQ80W14 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Prpf40bQ80W14 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.85■■□□□ 1.57
Prpf40bQ80W14 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Prpf40bQ80W14 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Prpf40bQ80W14 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Prpf40bQ80W14 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Prpf40bQ80W14 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Prpf40bQ80W14 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Prpf40bQ80W14 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Prpf40bQ80W14 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Prpf40bQ80W14 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Prpf40bQ80W14 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Prpf40bQ80W14 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Prpf40bQ80W14 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Prpf40bQ80W14 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Prpf40bQ80W14 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Prpf40bQ80W14 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.8■■□□□ 1.56
Prpf40bQ80W14 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Prpf40bQ80W14 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Prpf40bQ80W14 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
Prpf40bQ80W14 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Prpf40bQ80W14 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Prpf40bQ80W14 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Prpf40bQ80W14 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Prpf40bQ80W14 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Prpf40bQ80W14 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Prpf40bQ80W14 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Prpf40bQ80W14 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.78■■□□□ 1.56
Prpf40bQ80W14 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Prpf40bQ80W14 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Prpf40bQ80W14 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Prpf40bQ80W14 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Prpf40bQ80W14 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf40bQ80W14 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Prpf40bQ80W14 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.75■■□□□ 1.55
Prpf40bQ80W14 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Prpf40bQ80W14 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Prpf40bQ80W14 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.74■■□□□ 1.55
Prpf40bQ80W14 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.74■■□□□ 1.55
Prpf40bQ80W14 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Prpf40bQ80W14 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Prpf40bQ80W14 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Prpf40bQ80W14 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Prpf40bQ80W14 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf40bQ80W14 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf40bQ80W14 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf40bQ80W14 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf40bQ80W14 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Prpf40bQ80W14 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf40bQ80W14 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Prpf40bQ80W14 Gm22238-201ENSMUST00000175222 88 ntBASIC24.72■■□□□ 1.55
Prpf40bQ80W14 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.72■■□□□ 1.55
Prpf40bQ80W14 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Prpf40bQ80W14 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Prpf40bQ80W14 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms