Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh19Q80TF3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.22■□□□□ 0.99
Pcdh19Q80TF3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh19Q80TF3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh19Q80TF3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh19Q80TF3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh19Q80TF3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh19Q80TF3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh19Q80TF3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh19Q80TF3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh19Q80TF3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh19Q80TF3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdh19Q80TF3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh19Q80TF3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.2■□□□□ 0.98
Pcdh19Q80TF3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdh19Q80TF3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh19Q80TF3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh19Q80TF3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Pcdh19Q80TF3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh19Q80TF3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh19Q80TF3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdh19Q80TF3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdh19Q80TF3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdh19Q80TF3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pcdh19Q80TF3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh19Q80TF3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh19Q80TF3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh19Q80TF3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.15■□□□□ 0.98
Pcdh19Q80TF3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh19Q80TF3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh19Q80TF3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh19Q80TF3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh19Q80TF3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdh19Q80TF3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh19Q80TF3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh19Q80TF3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh19Q80TF3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh19Q80TF3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh19Q80TF3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh19Q80TF3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh19Q80TF3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh19Q80TF3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh19Q80TF3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.13■□□□□ 0.97
Pcdh19Q80TF3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh19Q80TF3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh19Q80TF3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh19Q80TF3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh19Q80TF3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh19Q80TF3 Gm14117-201ENSMUST00000122417 843 ntBASIC21.11■□□□□ 0.97
Pcdh19Q80TF3 Gm9959-201ENSMUST00000068277 390 ntBASIC21.11■□□□□ 0.97
Pcdh19Q80TF3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdh19Q80TF3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh19Q80TF3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh19Q80TF3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh19Q80TF3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh19Q80TF3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pcdh19Q80TF3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh19Q80TF3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.1■□□□□ 0.97
Pcdh19Q80TF3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms