Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc3Q64519 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc3Q64519 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc3Q64519 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc3Q64519 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc3Q64519 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sdc3Q64519 Gm45444-201ENSMUST00000211394 898 ntBASIC20.66■□□□□ 0.9
Sdc3Q64519 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc3Q64519 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc3Q64519 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc3Q64519 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sdc3Q64519 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc3Q64519 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sdc3Q64519 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sdc3Q64519 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Sdc3Q64519 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdc3Q64519 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.64■□□□□ 0.89
Sdc3Q64519 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.64■□□□□ 0.89
Sdc3Q64519 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc3Q64519 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc3Q64519 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc3Q64519 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.63■□□□□ 0.89
Sdc3Q64519 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc3Q64519 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.63■□□□□ 0.89
Sdc3Q64519 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.63■□□□□ 0.89
Sdc3Q64519 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc3Q64519 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdc3Q64519 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sdc3Q64519 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc3Q64519 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc3Q64519 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Sdc3Q64519 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.62■□□□□ 0.89
Sdc3Q64519 Gm43566-201ENSMUST00000196851 808 ntBASIC20.62■□□□□ 0.89
Sdc3Q64519 Gm15820-201ENSMUST00000201566 728 ntBASIC20.62■□□□□ 0.89
Sdc3Q64519 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdc3Q64519 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sdc3Q64519 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.62■□□□□ 0.89
Sdc3Q64519 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.62■□□□□ 0.89
Sdc3Q64519 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc3Q64519 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc3Q64519 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc3Q64519 Gm15546-201ENSMUST00000122095 826 ntBASIC20.61■□□□□ 0.89
Sdc3Q64519 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc3Q64519 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.61■□□□□ 0.89
Sdc3Q64519 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc3Q64519 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sdc3Q64519 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc3Q64519 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sdc3Q64519 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc3Q64519 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc3Q64519 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sdc3Q64519 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc3Q64519 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.6■□□□□ 0.89
Sdc3Q64519 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.6■□□□□ 0.89
Sdc3Q64519 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc3Q64519 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc3Q64519 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sdc3Q64519 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc3Q64519 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc3Q64519 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc3Q64519 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc3Q64519 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Sdc3Q64519 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.59■□□□□ 0.89
Sdc3Q64519 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc3Q64519 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc3Q64519 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Sdc3Q64519 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sdc3Q64519 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sdc3Q64519 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sdc3Q64519 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.58■□□□□ 0.89
Sdc3Q64519 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sdc3Q64519 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Sdc3Q64519 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.58■□□□□ 0.88
Sdc3Q64519 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc3Q64519 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.57■□□□□ 0.88
Sdc3Q64519 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Sdc3Q64519 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc3Q64519 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc3Q64519 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc3Q64519 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Sdc3Q64519 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc3Q64519 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc3Q64519 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc3Q64519 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Sdc3Q64519 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc3Q64519 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc3Q64519 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Sdc3Q64519 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.55■□□□□ 0.88
Sdc3Q64519 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc3Q64519 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sdc3Q64519 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.54■□□□□ 0.88
Sdc3Q64519 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms