Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Six3Q62233 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Six3Q62233 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six3Q62233 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six3Q62233 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.11■□□□□ 0.97
Six3Q62233 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six3Q62233 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Six3Q62233 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Six3Q62233 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Six3Q62233 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Six3Q62233 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Six3Q62233 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.09■□□□□ 0.97
Six3Q62233 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six3Q62233 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six3Q62233 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Six3Q62233 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Six3Q62233 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six3Q62233 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six3Q62233 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six3Q62233 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Six3Q62233 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six3Q62233 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
Six3Q62233 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Six3Q62233 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Six3Q62233 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Six3Q62233 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Six3Q62233 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.08■□□□□ 0.97
Six3Q62233 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.08■□□□□ 0.97
Six3Q62233 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Six3Q62233 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Six3Q62233 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Six3Q62233 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.07■□□□□ 0.96
Six3Q62233 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.07■□□□□ 0.96
Six3Q62233 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Six3Q62233 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Six3Q62233 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six3Q62233 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six3Q62233 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.07■□□□□ 0.96
Six3Q62233 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six3Q62233 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six3Q62233 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.06■□□□□ 0.96
Six3Q62233 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.06■□□□□ 0.96
Six3Q62233 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.06■□□□□ 0.96
Six3Q62233 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six3Q62233 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six3Q62233 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.05■□□□□ 0.96
Six3Q62233 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six3Q62233 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six3Q62233 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six3Q62233 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Six3Q62233 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six3Q62233 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six3Q62233 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six3Q62233 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six3Q62233 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Six3Q62233 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six3Q62233 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Six3Q62233 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six3Q62233 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Six3Q62233 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.01■□□□□ 0.95
Six3Q62233 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six3Q62233 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Six3Q62233 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.01■□□□□ 0.95
Six3Q62233 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Six3Q62233 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six3Q62233 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six3Q62233 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six3Q62233 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six3Q62233 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21■□□□□ 0.95
Six3Q62233 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21■□□□□ 0.95
Six3Q62233 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Six3Q62233 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six3Q62233 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six3Q62233 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21■□□□□ 0.95
Six3Q62233 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six3Q62233 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six3Q62233 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six3Q62233 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Six3Q62233 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six3Q62233 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six3Q62233 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six3Q62233 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six3Q62233 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six3Q62233 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six3Q62233 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.98■□□□□ 0.95
Six3Q62233 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six3Q62233 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six3Q62233 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six3Q62233 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six3Q62233 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six3Q62233 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six3Q62233 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six3Q62233 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six3Q62233 Gm11175-201ENSMUST00000116172 543 ntBASIC20.96■□□□□ 0.95
Six3Q62233 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Six3Q62233 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six3Q62233 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six3Q62233 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Six3Q62233 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six3Q62233 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms