Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav8d-2Q5R1B6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.45■■□□□ 1.02
Trav8d-2Q5R1B6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav8d-2Q5R1B6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Trav8d-2Q5R1B6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav8d-2Q5R1B6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.44■■□□□ 1.02
Trav8d-2Q5R1B6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav8d-2Q5R1B6 Gm45417-201ENSMUST00000209533 758 ntBASIC21.44■■□□□ 1.02
Trav8d-2Q5R1B6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav8d-2Q5R1B6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trav8d-2Q5R1B6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav8d-2Q5R1B6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trav8d-2Q5R1B6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.43■■□□□ 1.02
Trav8d-2Q5R1B6 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.43■■□□□ 1.02
Trav8d-2Q5R1B6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav8d-2Q5R1B6 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.43■■□□□ 1.02
Trav8d-2Q5R1B6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav8d-2Q5R1B6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Trav8d-2Q5R1B6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Golgb1-201ENSMUST00000023534 498 ntBASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8d-2Q5R1B6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trav8d-2Q5R1B6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.39■■□□□ 1.02
Trav8d-2Q5R1B6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trav8d-2Q5R1B6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trav8d-2Q5R1B6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav8d-2Q5R1B6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.38■■□□□ 1.01
Trav8d-2Q5R1B6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav8d-2Q5R1B6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trav8d-2Q5R1B6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
Trav8d-2Q5R1B6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trav8d-2Q5R1B6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav8d-2Q5R1B6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trav8d-2Q5R1B6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.37■■□□□ 1.01
Trav8d-2Q5R1B6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.37■■□□□ 1.01
Trav8d-2Q5R1B6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.37■■□□□ 1.01
Trav8d-2Q5R1B6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav8d-2Q5R1B6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.36■■□□□ 1.01
Trav8d-2Q5R1B6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav8d-2Q5R1B6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav8d-2Q5R1B6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav8d-2Q5R1B6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav8d-2Q5R1B6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.35■■□□□ 1.01
Trav8d-2Q5R1B6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trav8d-2Q5R1B6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
Trav8d-2Q5R1B6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav8d-2Q5R1B6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trav8d-2Q5R1B6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trav8d-2Q5R1B6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav8d-2Q5R1B6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.32■■□□□ 1
Trav8d-2Q5R1B6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.32■■□□□ 1
Trav8d-2Q5R1B6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.32■■□□□ 1
Trav8d-2Q5R1B6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trav8d-2Q5R1B6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.31■■□□□ 1
Trav8d-2Q5R1B6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.3■■□□□ 1
Trav8d-2Q5R1B6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.3■■□□□ 1
Trav8d-2Q5R1B6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav8d-2Q5R1B6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav8d-2Q5R1B6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav8d-2Q5R1B6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trav8d-2Q5R1B6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trav8d-2Q5R1B6 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.29■■□□□ 1
Trav8d-2Q5R1B6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trav8d-2Q5R1B6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trav8d-2Q5R1B6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trav8d-2Q5R1B6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav8d-2Q5R1B6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms