Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rc3h1Q4VGL6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.23■■□□□ 1.63
Rc3h1Q4VGL6 Gm10232-201ENSMUST00000089221 720 ntBASIC25.23■■□□□ 1.63
Rc3h1Q4VGL6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rc3h1Q4VGL6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rc3h1Q4VGL6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rc3h1Q4VGL6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rc3h1Q4VGL6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rc3h1Q4VGL6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rc3h1Q4VGL6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Rc3h1Q4VGL6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rc3h1Q4VGL6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rc3h1Q4VGL6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rc3h1Q4VGL6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rc3h1Q4VGL6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Rc3h1Q4VGL6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rc3h1Q4VGL6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.21■■□□□ 1.63
Rc3h1Q4VGL6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rc3h1Q4VGL6 Gm9959-201ENSMUST00000068277 390 ntBASIC25.2■■□□□ 1.62
Rc3h1Q4VGL6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rc3h1Q4VGL6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Rps24-207ENSMUST00000224568 714 ntBASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rc3h1Q4VGL6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rc3h1Q4VGL6 Gm14117-201ENSMUST00000122417 843 ntBASIC25.18■■□□□ 1.62
Rc3h1Q4VGL6 Gm45102-201ENSMUST00000207427 857 ntBASIC25.18■■□□□ 1.62
Rc3h1Q4VGL6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.18■■□□□ 1.62
Rc3h1Q4VGL6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rc3h1Q4VGL6 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.17■■□□□ 1.62
Rc3h1Q4VGL6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rc3h1Q4VGL6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rc3h1Q4VGL6 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.17■■□□□ 1.62
Rc3h1Q4VGL6 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.17■■□□□ 1.62
Rc3h1Q4VGL6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Rc3h1Q4VGL6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.16■■□□□ 1.62
Rc3h1Q4VGL6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rc3h1Q4VGL6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rc3h1Q4VGL6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rc3h1Q4VGL6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rc3h1Q4VGL6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rc3h1Q4VGL6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Rc3h1Q4VGL6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rc3h1Q4VGL6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rc3h1Q4VGL6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rc3h1Q4VGL6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rc3h1Q4VGL6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.14■■□□□ 1.62
Rc3h1Q4VGL6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rc3h1Q4VGL6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rc3h1Q4VGL6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.13■■□□□ 1.61
Rc3h1Q4VGL6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Rc3h1Q4VGL6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
Rc3h1Q4VGL6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Rc3h1Q4VGL6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rc3h1Q4VGL6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.12■■□□□ 1.61
Rc3h1Q4VGL6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Rc3h1Q4VGL6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Rc3h1Q4VGL6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rc3h1Q4VGL6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rc3h1Q4VGL6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Rc3h1Q4VGL6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.09■■□□□ 1.61
Rc3h1Q4VGL6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.09■■□□□ 1.61
Rc3h1Q4VGL6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rc3h1Q4VGL6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rc3h1Q4VGL6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rc3h1Q4VGL6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Rc3h1Q4VGL6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rc3h1Q4VGL6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.08■■□□□ 1.61
Rc3h1Q4VGL6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rc3h1Q4VGL6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Rc3h1Q4VGL6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rc3h1Q4VGL6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rc3h1Q4VGL6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rc3h1Q4VGL6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Rc3h1Q4VGL6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rc3h1Q4VGL6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.06■■□□□ 1.6
Rc3h1Q4VGL6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rc3h1Q4VGL6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rc3h1Q4VGL6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rc3h1Q4VGL6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.05■■□□□ 1.6
Rc3h1Q4VGL6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rc3h1Q4VGL6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.05■■□□□ 1.6
Rc3h1Q4VGL6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.05■■□□□ 1.6
Rc3h1Q4VGL6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rc3h1Q4VGL6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rc3h1Q4VGL6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rc3h1Q4VGL6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Rc3h1Q4VGL6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rc3h1Q4VGL6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Rc3h1Q4VGL6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.04■■□□□ 1.6
Rc3h1Q4VGL6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rc3h1Q4VGL6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rc3h1Q4VGL6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rc3h1Q4VGL6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rc3h1Q4VGL6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms