Protein–RNA interactions for Protein: Q3UF64

Rnft2, RING finger and transmembrane domain-containing protein 2, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft2Q3UF64 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Mir3960-201ENSMUST00000198213 73 ntBASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnft2Q3UF64 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnft2Q3UF64 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnft2Q3UF64 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnft2Q3UF64 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnft2Q3UF64 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rnft2Q3UF64 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnft2Q3UF64 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rnft2Q3UF64 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnft2Q3UF64 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnft2Q3UF64 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnft2Q3UF64 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rnft2Q3UF64 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnft2Q3UF64 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnft2Q3UF64 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnft2Q3UF64 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.58
Rnft2Q3UF64 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnft2Q3UF64 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnft2Q3UF64 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnft2Q3UF64 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Gm45364-201ENSMUST00000210883 159 ntBASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnft2Q3UF64 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Notumos-201ENSMUST00000151998 2659 ntBASIC18.68■□□□□ 0.58
Rnft2Q3UF64 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnft2Q3UF64 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnft2Q3UF64 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnft2Q3UF64 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnft2Q3UF64 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnft2Q3UF64 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.67■□□□□ 0.58
Rnft2Q3UF64 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnft2Q3UF64 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.67■□□□□ 0.58
Rnft2Q3UF64 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnft2Q3UF64 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnft2Q3UF64 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnft2Q3UF64 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnft2Q3UF64 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.66■□□□□ 0.58
Rnft2Q3UF64 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rnft2Q3UF64 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnft2Q3UF64 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnft2Q3UF64 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.65■□□□□ 0.58
Rnft2Q3UF64 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnft2Q3UF64 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnft2Q3UF64 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnft2Q3UF64 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnft2Q3UF64 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnft2Q3UF64 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnft2Q3UF64 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Gm9806-201ENSMUST00000051080 552 ntBASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnft2Q3UF64 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms