Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ush2AQ2QI47 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.19□□□□□ -0.46
Ush2AQ2QI47 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ush2AQ2QI47 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.17□□□□□ -0.46
Ush2AQ2QI47 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ush2AQ2QI47 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ush2AQ2QI47 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ush2AQ2QI47 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.17□□□□□ -0.46
Ush2AQ2QI47 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ush2AQ2QI47 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ush2AQ2QI47 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ush2AQ2QI47 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ush2AQ2QI47 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ush2AQ2QI47 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ush2AQ2QI47 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ush2AQ2QI47 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ush2AQ2QI47 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ush2AQ2QI47 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Ush2AQ2QI47 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ush2AQ2QI47 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Ush2AQ2QI47 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Mir7071-201ENSMUST00000184847 69 ntBASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Nespas-201ENSMUST00000143738 1083 ntBASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ush2AQ2QI47 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.12□□□□□ -0.47
Ush2AQ2QI47 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.12□□□□□ -0.47
Ush2AQ2QI47 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ush2AQ2QI47 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ush2AQ2QI47 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.11□□□□□ -0.47
Ush2AQ2QI47 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ush2AQ2QI47 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ush2AQ2QI47 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ush2AQ2QI47 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ush2AQ2QI47 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ush2AQ2QI47 Gm7977-201ENSMUST00000193787 748 ntBASIC12.1□□□□□ -0.47
Ush2AQ2QI47 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ush2AQ2QI47 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ush2AQ2QI47 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ush2AQ2QI47 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
Ush2AQ2QI47 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ush2AQ2QI47 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ush2AQ2QI47 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.09□□□□□ -0.47
Ush2AQ2QI47 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.09□□□□□ -0.47
Ush2AQ2QI47 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ush2AQ2QI47 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.09□□□□□ -0.47
Ush2AQ2QI47 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ush2AQ2QI47 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ush2AQ2QI47 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ush2AQ2QI47 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ush2AQ2QI47 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ush2AQ2QI47 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ush2AQ2QI47 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Gm10493-201ENSMUST00000097270 612 ntBASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Gm42642-201ENSMUST00000200683 355 ntBASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ush2AQ2QI47 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms