Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smad5P97454 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.37■□□□□ 0.85
Smad5P97454 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.37■□□□□ 0.85
Smad5P97454 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smad5P97454 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smad5P97454 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smad5P97454 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smad5P97454 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smad5P97454 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad5P97454 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Smad5P97454 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad5P97454 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smad5P97454 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad5P97454 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad5P97454 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad5P97454 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smad5P97454 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad5P97454 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad5P97454 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smad5P97454 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.34■□□□□ 0.85
Smad5P97454 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.34■□□□□ 0.85
Smad5P97454 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Smad5P97454 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad5P97454 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smad5P97454 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smad5P97454 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smad5P97454 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smad5P97454 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smad5P97454 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smad5P97454 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smad5P97454 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Smad5P97454 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Smad5P97454 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.33■□□□□ 0.85
Smad5P97454 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.33■□□□□ 0.84
Smad5P97454 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smad5P97454 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smad5P97454 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Smad5P97454 Gm45102-201ENSMUST00000207427 857 ntBASIC20.32■□□□□ 0.84
Smad5P97454 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad5P97454 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad5P97454 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad5P97454 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.32■□□□□ 0.84
Smad5P97454 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad5P97454 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smad5P97454 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smad5P97454 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.31■□□□□ 0.84
Smad5P97454 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smad5P97454 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smad5P97454 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smad5P97454 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.3■□□□□ 0.84
Smad5P97454 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smad5P97454 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smad5P97454 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smad5P97454 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smad5P97454 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.29■□□□□ 0.84
Smad5P97454 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smad5P97454 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smad5P97454 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Smad5P97454 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smad5P97454 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.29■□□□□ 0.84
Smad5P97454 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smad5P97454 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smad5P97454 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smad5P97454 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smad5P97454 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.28■□□□□ 0.84
Smad5P97454 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Smad5P97454 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Smad5P97454 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad5P97454 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smad5P97454 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad5P97454 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad5P97454 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.27■□□□□ 0.84
Smad5P97454 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smad5P97454 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.27■□□□□ 0.84
Smad5P97454 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smad5P97454 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smad5P97454 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad5P97454 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smad5P97454 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Smad5P97454 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad5P97454 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad5P97454 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Smad5P97454 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad5P97454 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smad5P97454 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad5P97454 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad5P97454 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smad5P97454 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smad5P97454 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad5P97454 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smad5P97454 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad5P97454 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad5P97454 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms