Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Lhx1P63006 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.32■■□□□ 1
Lhx1P63006 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.32■■□□□ 1
Lhx1P63006 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lhx1P63006 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lhx1P63006 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lhx1P63006 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx1P63006 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx1P63006 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Lhx1P63006 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.31■■□□□ 1
Lhx1P63006 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx1P63006 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx1P63006 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx1P63006 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx1P63006 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx1P63006 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx1P63006 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx1P63006 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx1P63006 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lhx1P63006 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lhx1P63006 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.29■■□□□ 1
Lhx1P63006 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lhx1P63006 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.29■■□□□ 1
Lhx1P63006 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.29■■□□□ 1
Lhx1P63006 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Lhx1P63006 Gm15820-201ENSMUST00000201566 728 ntBASIC21.29■■□□□ 1
Lhx1P63006 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.29■■□□□ 1
Lhx1P63006 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.29■■□□□ 1
Lhx1P63006 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lhx1P63006 Gm10232-201ENSMUST00000089221 720 ntBASIC21.29■■□□□ 1
Lhx1P63006 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Lhx1P63006 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lhx1P63006 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lhx1P63006 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lhx1P63006 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lhx1P63006 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lhx1P63006 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lhx1P63006 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lhx1P63006 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lhx1P63006 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lhx1P63006 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lhx1P63006 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Lhx1P63006 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lhx1P63006 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lhx1P63006 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lhx1P63006 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.27■■□□□ 1
Lhx1P63006 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lhx1P63006 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lhx1P63006 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Lhx1P63006 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.27■□□□□ 0.99
Lhx1P63006 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lhx1P63006 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.26■□□□□ 0.99
Lhx1P63006 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.26■□□□□ 0.99
Lhx1P63006 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lhx1P63006 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lhx1P63006 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.25■□□□□ 0.99
Lhx1P63006 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Lhx1P63006 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lhx1P63006 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lhx1P63006 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx1P63006 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx1P63006 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx1P63006 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Lhx1P63006 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx1P63006 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.24■□□□□ 0.99
Lhx1P63006 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx1P63006 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx1P63006 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Lhx1P63006 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lhx1P63006 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lhx1P63006 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lhx1P63006 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Lhx1P63006 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lhx1P63006 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lhx1P63006 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Lhx1P63006 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Lhx1P63006 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lhx1P63006 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.21■□□□□ 0.99
Lhx1P63006 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.21■□□□□ 0.99
Lhx1P63006 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lhx1P63006 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lhx1P63006 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lhx1P63006 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.2■□□□□ 0.98
Lhx1P63006 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Lhx1P63006 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Lhx1P63006 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lhx1P63006 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx1P63006 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx1P63006 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx1P63006 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx1P63006 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx1P63006 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx1P63006 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.19■□□□□ 0.98
Lhx1P63006 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx1P63006 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx1P63006 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx1P63006 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx1P63006 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.18■□□□□ 0.98
Lhx1P63006 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx1P63006 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms