Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sssca1P56873 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sssca1P56873 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sssca1P56873 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sssca1P56873 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sssca1P56873 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Sssca1P56873 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sssca1P56873 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sssca1P56873 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sssca1P56873 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sssca1P56873 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sssca1P56873 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.38■□□□□ 0.37
Sssca1P56873 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.38■□□□□ 0.37
Sssca1P56873 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sssca1P56873 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sssca1P56873 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sssca1P56873 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sssca1P56873 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sssca1P56873 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sssca1P56873 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.38■□□□□ 0.37
Sssca1P56873 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sssca1P56873 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.38■□□□□ 0.37
Sssca1P56873 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sssca1P56873 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sssca1P56873 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sssca1P56873 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sssca1P56873 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sssca1P56873 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.36■□□□□ 0.37
Sssca1P56873 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sssca1P56873 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sssca1P56873 Gm45364-201ENSMUST00000210883 159 ntBASIC17.36■□□□□ 0.37
Sssca1P56873 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sssca1P56873 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sssca1P56873 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.36■□□□□ 0.37
Sssca1P56873 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.35■□□□□ 0.37
Sssca1P56873 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sssca1P56873 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.35■□□□□ 0.37
Sssca1P56873 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sssca1P56873 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.35■□□□□ 0.37
Sssca1P56873 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sssca1P56873 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sssca1P56873 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.34■□□□□ 0.37
Sssca1P56873 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sssca1P56873 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sssca1P56873 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sssca1P56873 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sssca1P56873 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Sssca1P56873 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sssca1P56873 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.33■□□□□ 0.36
Sssca1P56873 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sssca1P56873 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sssca1P56873 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
Sssca1P56873 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sssca1P56873 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sssca1P56873 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sssca1P56873 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sssca1P56873 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sssca1P56873 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Sssca1P56873 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sssca1P56873 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sssca1P56873 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.31■□□□□ 0.36
Sssca1P56873 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sssca1P56873 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Gm7432-201ENSMUST00000210343 879 ntBASIC17.31■□□□□ 0.36
Sssca1P56873 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sssca1P56873 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sssca1P56873 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sssca1P56873 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.3■□□□□ 0.36
Sssca1P56873 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sssca1P56873 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sssca1P56873 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sssca1P56873 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sssca1P56873 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sssca1P56873 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sssca1P56873 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 269.8 ms