Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox3P53784 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Sox3P53784 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox3P53784 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox3P53784 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.56■□□□□ 0.88
Sox3P53784 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox3P53784 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox3P53784 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Sox3P53784 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sox3P53784 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Sox3P53784 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sox3P53784 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sox3P53784 Gm13241-201ENSMUST00000094493 780 ntBASIC20.54■□□□□ 0.88
Sox3P53784 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox3P53784 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sox3P53784 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Sox3P53784 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sox3P53784 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sox3P53784 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sox3P53784 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox3P53784 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox3P53784 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sox3P53784 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox3P53784 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sox3P53784 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Sox3P53784 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox3P53784 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.51■□□□□ 0.87
Sox3P53784 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox3P53784 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox3P53784 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox3P53784 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.51■□□□□ 0.87
Sox3P53784 Gm10232-201ENSMUST00000089221 720 ntBASIC20.51■□□□□ 0.87
Sox3P53784 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox3P53784 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox3P53784 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox3P53784 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sox3P53784 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.5■□□□□ 0.87
Sox3P53784 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sox3P53784 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox3P53784 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox3P53784 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox3P53784 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.49■□□□□ 0.87
Sox3P53784 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.49■□□□□ 0.87
Sox3P53784 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.49■□□□□ 0.87
Sox3P53784 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.49■□□□□ 0.87
Sox3P53784 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox3P53784 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox3P53784 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox3P53784 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox3P53784 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sox3P53784 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox3P53784 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox3P53784 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sox3P53784 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sox3P53784 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sox3P53784 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.48■□□□□ 0.87
Sox3P53784 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.48■□□□□ 0.87
Sox3P53784 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Sox3P53784 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sox3P53784 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Sox3P53784 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.47■□□□□ 0.87
Sox3P53784 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox3P53784 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.47■□□□□ 0.87
Sox3P53784 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.47■□□□□ 0.87
Sox3P53784 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox3P53784 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox3P53784 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox3P53784 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox3P53784 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sox3P53784 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox3P53784 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox3P53784 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.46■□□□□ 0.87
Sox3P53784 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox3P53784 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.46■□□□□ 0.87
Sox3P53784 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox3P53784 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox3P53784 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox3P53784 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox3P53784 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox3P53784 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox3P53784 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.45■□□□□ 0.86
Sox3P53784 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sox3P53784 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox3P53784 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox3P53784 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sox3P53784 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox3P53784 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Sox3P53784 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox3P53784 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Sox3P53784 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox3P53784 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Sox3P53784 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox3P53784 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox3P53784 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox3P53784 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sox3P53784 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.42■□□□□ 0.86
Sox3P53784 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox3P53784 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox3P53784 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.42■□□□□ 0.86
Sox3P53784 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms