Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RxrbP28704 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RxrbP28704 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RxrbP28704 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RxrbP28704 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RxrbP28704 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RxrbP28704 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RxrbP28704 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.75■■□□□ 1.07
RxrbP28704 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RxrbP28704 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RxrbP28704 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RxrbP28704 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RxrbP28704 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.74■■□□□ 1.07
RxrbP28704 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RxrbP28704 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RxrbP28704 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.74■■□□□ 1.07
RxrbP28704 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RxrbP28704 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RxrbP28704 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RxrbP28704 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RxrbP28704 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.73■■□□□ 1.07
RxrbP28704 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RxrbP28704 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RxrbP28704 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RxrbP28704 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RxrbP28704 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RxrbP28704 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RxrbP28704 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.72■■□□□ 1.07
RxrbP28704 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.72■■□□□ 1.07
RxrbP28704 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.72■■□□□ 1.07
RxrbP28704 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RxrbP28704 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RxrbP28704 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RxrbP28704 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RxrbP28704 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RxrbP28704 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RxrbP28704 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RxrbP28704 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RxrbP28704 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.71■■□□□ 1.07
RxrbP28704 Gm4799-201ENSMUST00000095396 657 ntBASIC21.71■■□□□ 1.07
RxrbP28704 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RxrbP28704 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RxrbP28704 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RxrbP28704 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RxrbP28704 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RxrbP28704 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RxrbP28704 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RxrbP28704 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RxrbP28704 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RxrbP28704 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RxrbP28704 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RxrbP28704 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RxrbP28704 Gm7432-201ENSMUST00000210343 879 ntBASIC21.69■■□□□ 1.06
RxrbP28704 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RxrbP28704 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RxrbP28704 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RxrbP28704 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.68■■□□□ 1.06
RxrbP28704 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RxrbP28704 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RxrbP28704 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RxrbP28704 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.67■■□□□ 1.06
RxrbP28704 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RxrbP28704 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RxrbP28704 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.67■■□□□ 1.06
RxrbP28704 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RxrbP28704 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.66■■□□□ 1.06
RxrbP28704 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
RxrbP28704 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RxrbP28704 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.66■■□□□ 1.06
RxrbP28704 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RxrbP28704 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RxrbP28704 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RxrbP28704 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.65■■□□□ 1.06
RxrbP28704 Gm9812-201ENSMUST00000061934 968 ntBASIC21.65■■□□□ 1.06
RxrbP28704 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RxrbP28704 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RxrbP28704 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RxrbP28704 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RxrbP28704 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RxrbP28704 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
RxrbP28704 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RxrbP28704 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RxrbP28704 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RxrbP28704 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RxrbP28704 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RxrbP28704 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RxrbP28704 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RxrbP28704 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.63■■□□□ 1.05
RxrbP28704 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RxrbP28704 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RxrbP28704 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RxrbP28704 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RxrbP28704 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RxrbP28704 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.63■■□□□ 1.05
RxrbP28704 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RxrbP28704 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RxrbP28704 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RxrbP28704 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RxrbP28704 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RxrbP28704 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms