Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.52■■□□□ 1.04
Nckap1P28660 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nckap1P28660 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nckap1P28660 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nckap1P28660 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.51■■□□□ 1.03
Nckap1P28660 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.51■■□□□ 1.03
Nckap1P28660 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nckap1P28660 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nckap1P28660 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nckap1P28660 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Nckap1P28660 Gm7417-201ENSMUST00000192950 473 ntBASIC21.5■■□□□ 1.03
Nckap1P28660 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Nckap1P28660 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Nckap1P28660 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nckap1P28660 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nckap1P28660 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.49■■□□□ 1.03
Nckap1P28660 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nckap1P28660 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.49■■□□□ 1.03
Nckap1P28660 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.49■■□□□ 1.03
Nckap1P28660 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.49■■□□□ 1.03
Nckap1P28660 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.49■■□□□ 1.03
Nckap1P28660 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nckap1P28660 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nckap1P28660 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Nckap1P28660 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nckap1P28660 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.48■■□□□ 1.03
Nckap1P28660 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nckap1P28660 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nckap1P28660 Gm15039-201ENSMUST00000118914 875 ntBASIC21.48■■□□□ 1.03
Nckap1P28660 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nckap1P28660 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nckap1P28660 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nckap1P28660 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nckap1P28660 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nckap1P28660 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nckap1P28660 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nckap1P28660 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.47■■□□□ 1.03
Nckap1P28660 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.47■■□□□ 1.03
Nckap1P28660 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nckap1P28660 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nckap1P28660 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nckap1P28660 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nckap1P28660 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nckap1P28660 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Nckap1P28660 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nckap1P28660 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.46■■□□□ 1.03
Nckap1P28660 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nckap1P28660 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nckap1P28660 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nckap1P28660 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Nckap1P28660 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.45■■□□□ 1.02
Nckap1P28660 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nckap1P28660 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Nckap1P28660 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nckap1P28660 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nckap1P28660 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nckap1P28660 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nckap1P28660 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.44■■□□□ 1.02
Nckap1P28660 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nckap1P28660 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nckap1P28660 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nckap1P28660 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Nckap1P28660 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nckap1P28660 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nckap1P28660 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nckap1P28660 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.43■■□□□ 1.02
Nckap1P28660 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.43■■□□□ 1.02
Nckap1P28660 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nckap1P28660 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nckap1P28660 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nckap1P28660 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nckap1P28660 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.42■■□□□ 1.02
Nckap1P28660 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.42■■□□□ 1.02
Nckap1P28660 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Nckap1P28660 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nckap1P28660 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nckap1P28660 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nckap1P28660 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nckap1P28660 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nckap1P28660 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nckap1P28660 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nckap1P28660 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nckap1P28660 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Nckap1P28660 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.4■■□□□ 1.02
Nckap1P28660 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Nckap1P28660 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nckap1P28660 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1P28660 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1P28660 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Nckap1P28660 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.01
Nckap1P28660 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1P28660 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.39■■□□□ 1.01
Nckap1P28660 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1P28660 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nckap1P28660 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1P28660 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1P28660 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.38■■□□□ 1.01
Nckap1P28660 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1P28660 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nckap1P28660 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms