Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cntn1P12960 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cntn1P12960 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.72■□□□□ 0.91
Cntn1P12960 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.72■□□□□ 0.91
Cntn1P12960 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cntn1P12960 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cntn1P12960 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cntn1P12960 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cntn1P12960 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cntn1P12960 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Cntn1P12960 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cntn1P12960 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cntn1P12960 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cntn1P12960 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.71■□□□□ 0.91
Cntn1P12960 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cntn1P12960 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cntn1P12960 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cntn1P12960 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cntn1P12960 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cntn1P12960 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cntn1P12960 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cntn1P12960 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cntn1P12960 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cntn1P12960 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cntn1P12960 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cntn1P12960 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cntn1P12960 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cntn1P12960 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Cntn1P12960 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cntn1P12960 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cntn1P12960 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cntn1P12960 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cntn1P12960 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cntn1P12960 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cntn1P12960 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cntn1P12960 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Cntn1P12960 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cntn1P12960 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.67■□□□□ 0.9
Cntn1P12960 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.67■□□□□ 0.9
Cntn1P12960 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cntn1P12960 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cntn1P12960 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cntn1P12960 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cntn1P12960 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cntn1P12960 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cntn1P12960 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.65■□□□□ 0.9
Cntn1P12960 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cntn1P12960 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cntn1P12960 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cntn1P12960 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cntn1P12960 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cntn1P12960 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cntn1P12960 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cntn1P12960 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cntn1P12960 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cntn1P12960 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.62■□□□□ 0.89
Cntn1P12960 Gm10232-201ENSMUST00000089221 720 ntBASIC20.62■□□□□ 0.89
Cntn1P12960 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cntn1P12960 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cntn1P12960 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cntn1P12960 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cntn1P12960 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cntn1P12960 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.61■□□□□ 0.89
Cntn1P12960 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.61■□□□□ 0.89
Cntn1P12960 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cntn1P12960 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cntn1P12960 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cntn1P12960 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cntn1P12960 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntn1P12960 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntn1P12960 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.6■□□□□ 0.89
Cntn1P12960 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cntn1P12960 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntn1P12960 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntn1P12960 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cntn1P12960 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cntn1P12960 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntn1P12960 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cntn1P12960 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.59■□□□□ 0.89
Cntn1P12960 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cntn1P12960 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cntn1P12960 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.59■□□□□ 0.89
Cntn1P12960 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cntn1P12960 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cntn1P12960 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cntn1P12960 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Cntn1P12960 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.58■□□□□ 0.89
Cntn1P12960 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntn1P12960 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntn1P12960 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cntn1P12960 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.58■□□□□ 0.89
Cntn1P12960 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cntn1P12960 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms