Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxa3P02831 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Hoxa3P02831 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.01■□□□□ 0.47
Hoxa3P02831 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxa3P02831 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxa3P02831 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxa3P02831 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Hoxa3P02831 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.01■□□□□ 0.47
Hoxa3P02831 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxa3P02831 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hoxa3P02831 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxa3P02831 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hoxa3P02831 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxa3P02831 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxa3P02831 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hoxa3P02831 Gm15820-201ENSMUST00000201566 728 ntBASIC17.99■□□□□ 0.47
Hoxa3P02831 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxa3P02831 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxa3P02831 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hoxa3P02831 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxa3P02831 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxa3P02831 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxa3P02831 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxa3P02831 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxa3P02831 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxa3P02831 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxa3P02831 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.98■□□□□ 0.47
Hoxa3P02831 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.98■□□□□ 0.47
Hoxa3P02831 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxa3P02831 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Hoxa3P02831 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxa3P02831 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hoxa3P02831 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Hoxa3P02831 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Hoxa3P02831 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.97■□□□□ 0.47
Hoxa3P02831 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hoxa3P02831 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxa3P02831 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxa3P02831 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxa3P02831 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Hoxa3P02831 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxa3P02831 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxa3P02831 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxa3P02831 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Gm22567-201ENSMUST00000175542 342 ntBASIC17.95■□□□□ 0.46
Hoxa3P02831 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hoxa3P02831 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxa3P02831 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxa3P02831 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxa3P02831 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxa3P02831 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.94■□□□□ 0.46
Hoxa3P02831 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hoxa3P02831 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxa3P02831 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxa3P02831 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hoxa3P02831 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Hoxa3P02831 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxa3P02831 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.93■□□□□ 0.46
Hoxa3P02831 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Hoxa3P02831 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxa3P02831 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Hoxa3P02831 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.92■□□□□ 0.46
Hoxa3P02831 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hoxa3P02831 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.92■□□□□ 0.46
Hoxa3P02831 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.92■□□□□ 0.46
Hoxa3P02831 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.92■□□□□ 0.46
Hoxa3P02831 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hoxa3P02831 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxa3P02831 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hoxa3P02831 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxa3P02831 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.91■□□□□ 0.46
Hoxa3P02831 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hoxa3P02831 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxa3P02831 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxa3P02831 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms