Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.68■□□□□ 0.1
TcraP01849 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TcraP01849 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TcraP01849 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.67■□□□□ 0.1
TcraP01849 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TcraP01849 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TcraP01849 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.67■□□□□ 0.1
TcraP01849 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TcraP01849 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.66■□□□□ 0.1
TcraP01849 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TcraP01849 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TcraP01849 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TcraP01849 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TcraP01849 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TcraP01849 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.66■□□□□ 0.1
TcraP01849 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TcraP01849 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TcraP01849 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TcraP01849 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TcraP01849 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
TcraP01849 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TcraP01849 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TcraP01849 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TcraP01849 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TcraP01849 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TcraP01849 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TcraP01849 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.64■□□□□ 0.09
TcraP01849 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TcraP01849 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TcraP01849 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TcraP01849 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TcraP01849 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TcraP01849 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
TcraP01849 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TcraP01849 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.62■□□□□ 0.09
TcraP01849 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TcraP01849 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TcraP01849 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TcraP01849 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.61■□□□□ 0.09
TcraP01849 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TcraP01849 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TcraP01849 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TcraP01849 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TcraP01849 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TcraP01849 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TcraP01849 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TcraP01849 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.6■□□□□ 0.09
TcraP01849 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TcraP01849 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TcraP01849 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TcraP01849 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TcraP01849 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TcraP01849 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TcraP01849 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TcraP01849 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TcraP01849 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TcraP01849 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TcraP01849 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.59■□□□□ 0.09
TcraP01849 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TcraP01849 Nkain2-201ENSMUST00000092602 558 ntBASIC15.59■□□□□ 0.09
TcraP01849 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TcraP01849 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TcraP01849 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.58■□□□□ 0.08
TcraP01849 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TcraP01849 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TcraP01849 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TcraP01849 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TcraP01849 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TcraP01849 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TcraP01849 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.57■□□□□ 0.08
TcraP01849 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TcraP01849 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TcraP01849 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.57■□□□□ 0.08
TcraP01849 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TcraP01849 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TcraP01849 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.57■□□□□ 0.08
TcraP01849 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TcraP01849 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TcraP01849 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TcraP01849 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TcraP01849 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TcraP01849 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TcraP01849 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TcraP01849 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TcraP01849 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TcraP01849 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.56■□□□□ 0.08
TcraP01849 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms