Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.03■□□□□ 0.32
P01788 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01788 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01788 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01788 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01788 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01788 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P01788 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01788 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.02■□□□□ 0.32
P01788 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01788 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.02■□□□□ 0.32
P01788 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01788 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.02■□□□□ 0.31
P01788 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.02■□□□□ 0.31
P01788 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P01788 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01788 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P01788 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
P01788 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.01■□□□□ 0.31
P01788 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01788 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01788 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01788 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01788 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
P01788 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01788 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
P01788 Gm7432-201ENSMUST00000210343 879 ntBASIC17■□□□□ 0.31
P01788 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01788 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01788 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01788 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01788 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01788 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P01788 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.99■□□□□ 0.31
P01788 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01788 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
P01788 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.99■□□□□ 0.31
P01788 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01788 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
P01788 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01788 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01788 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01788 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01788 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01788 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P01788 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.97■□□□□ 0.31
P01788 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
P01788 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P01788 Gm11599-201ENSMUST00000118720 878 ntBASIC16.97■□□□□ 0.31
P01788 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01788 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01788 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01788 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P01788 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
P01788 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
P01788 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
P01788 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
P01788 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.96■□□□□ 0.3
P01788 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
P01788 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01788 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01788 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01788 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01788 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.95■□□□□ 0.3
P01788 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01788 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P01788 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01788 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.95■□□□□ 0.3
P01788 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01788 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
P01788 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01788 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P01788 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P01788 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01788 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01788 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01788 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
P01788 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
P01788 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.93■□□□□ 0.3
P01788 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.93■□□□□ 0.3
P01788 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.93■□□□□ 0.3
P01788 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01788 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01788 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01788 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01788 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P01788 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
P01788 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.92■□□□□ 0.3
P01788 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
P01788 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
P01788 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.92■□□□□ 0.3
P01788 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P01788 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms