Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.49■■□□□ 1.19
Syn1O88935 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Syn1O88935 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Syn1O88935 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Syn1O88935 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Syn1O88935 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Syn1O88935 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.48■■□□□ 1.19
Syn1O88935 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Syn1O88935 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Syn1O88935 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Syn1O88935 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Syn1O88935 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Syn1O88935 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.47■■□□□ 1.19
Syn1O88935 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Syn1O88935 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Syn1O88935 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.47■■□□□ 1.19
Syn1O88935 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Syn1O88935 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.46■■□□□ 1.19
Syn1O88935 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Syn1O88935 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Syn1O88935 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Syn1O88935 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
Syn1O88935 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Syn1O88935 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Syn1O88935 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Syn1O88935 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Syn1O88935 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Syn1O88935 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
Syn1O88935 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Syn1O88935 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Syn1O88935 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.45■■□□□ 1.18
Syn1O88935 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Syn1O88935 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Syn1O88935 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Syn1O88935 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.44■■□□□ 1.18
Syn1O88935 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Syn1O88935 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Syn1O88935 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Syn1O88935 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Syn1O88935 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.44■■□□□ 1.18
Syn1O88935 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Syn1O88935 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Syn1O88935 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Syn1O88935 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.43■■□□□ 1.18
Syn1O88935 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Syn1O88935 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Syn1O88935 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Syn1O88935 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Syn1O88935 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Syn1O88935 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.42■■□□□ 1.18
Syn1O88935 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Syn1O88935 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.42■■□□□ 1.18
Syn1O88935 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Syn1O88935 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Syn1O88935 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Syn1O88935 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.41■■□□□ 1.18
Syn1O88935 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Syn1O88935 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Syn1O88935 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Syn1O88935 Gm10399-202ENSMUST00000202768 748 ntBASIC22.41■■□□□ 1.18
Syn1O88935 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Syn1O88935 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Syn1O88935 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Syn1O88935 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.4■■□□□ 1.18
Syn1O88935 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.4■■□□□ 1.18
Syn1O88935 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Syn1O88935 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.39■■□□□ 1.18
Syn1O88935 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Syn1O88935 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.39■■□□□ 1.17
Syn1O88935 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.39■■□□□ 1.17
Syn1O88935 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Syn1O88935 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Syn1O88935 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Syn1O88935 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.38■■□□□ 1.17
Syn1O88935 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
Syn1O88935 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Syn1O88935 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Syn1O88935 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Syn1O88935 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Syn1O88935 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.37■■□□□ 1.17
Syn1O88935 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Syn1O88935 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Syn1O88935 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.36■■□□□ 1.17
Syn1O88935 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.36■■□□□ 1.17
Syn1O88935 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.36■■□□□ 1.17
Syn1O88935 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Syn1O88935 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Syn1O88935 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Syn1O88935 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Syn1O88935 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Syn1O88935 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Syn1O88935 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.35■■□□□ 1.17
Syn1O88935 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Syn1O88935 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Syn1O88935 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Syn1O88935 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Syn1O88935 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Syn1O88935 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Syn1O88935 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Syn1O88935 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms