Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hdac3O88895 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.18■□□□□ 0.66
Hdac3O88895 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac3O88895 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac3O88895 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac3O88895 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac3O88895 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac3O88895 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac3O88895 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac3O88895 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Hdac3O88895 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.17■□□□□ 0.66
Hdac3O88895 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Hdac3O88895 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.17■□□□□ 0.66
Hdac3O88895 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hdac3O88895 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hdac3O88895 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac3O88895 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac3O88895 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac3O88895 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac3O88895 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac3O88895 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac3O88895 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.15■□□□□ 0.66
Hdac3O88895 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hdac3O88895 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hdac3O88895 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.14■□□□□ 0.65
Hdac3O88895 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac3O88895 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Hdac3O88895 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac3O88895 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
Hdac3O88895 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac3O88895 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hdac3O88895 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac3O88895 Mir6538-201ENSMUST00000183713 110 ntBASIC19.13■□□□□ 0.65
Hdac3O88895 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.13■□□□□ 0.65
Hdac3O88895 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac3O88895 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hdac3O88895 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hdac3O88895 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac3O88895 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac3O88895 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac3O88895 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hdac3O88895 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac3O88895 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hdac3O88895 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac3O88895 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.12■□□□□ 0.65
Hdac3O88895 Gm11175-201ENSMUST00000116172 543 ntBASIC19.12■□□□□ 0.65
Hdac3O88895 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hdac3O88895 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hdac3O88895 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac3O88895 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hdac3O88895 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.11■□□□□ 0.65
Hdac3O88895 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac3O88895 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hdac3O88895 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac3O88895 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac3O88895 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hdac3O88895 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.1■□□□□ 0.65
Hdac3O88895 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hdac3O88895 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac3O88895 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac3O88895 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac3O88895 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac3O88895 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac3O88895 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac3O88895 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac3O88895 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac3O88895 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.08■□□□□ 0.64
Hdac3O88895 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac3O88895 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac3O88895 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac3O88895 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac3O88895 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Hdac3O88895 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hdac3O88895 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac3O88895 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac3O88895 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac3O88895 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac3O88895 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac3O88895 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hdac3O88895 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hdac3O88895 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.06■□□□□ 0.64
Hdac3O88895 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac3O88895 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hdac3O88895 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac3O88895 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac3O88895 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms